SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90629

Length: 1360 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90629

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DAG protein n=1 Tax=Zea mays RepID=B6SJX7_MAIZE	-	-	3.00018e-42	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	51%
Blast2go	dag protein	-	-	0.0	73%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	0.0	73%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	0.0	73%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVN0

Fln msg: query STOP codon too far from subject stop. Distance to subject end: 119 aas, putative chimeric sequence, atg_distance in limit (1-15): atg_distance = 16, W2: There is no M at the beginning, your sequence is shorter than subject: 295 - 525

Fln protein: AFSTATLSRAPPSDRLVPVAFSVEGHLTGFSLPSPLSQCLIGRRRVSTYGPVCSPVDSDNKRGDTTILFEGCDYEHWLITMEFPDPQPTREEKIDTFIKTLAKVVGSEEEAKKRIYALSTTTYTGFQAQISEELSEKMKGLPGVVWVLPDSYIDPVNKEYGGDKYINGVIIPDTRVYNNRSSGRYNDRPRNRNRRDSMPVERRDPMPMDGRGGMQGDRRDFRPPLEGRGPMPGGQQDYNRPQQDYNRPQDYNRPPPQGPFPTDRQDYNRPPPPPPMEGRGPVPGGPQDYNRPPQ*

Protein Length: 296

Fln nts: GCCTTCTCTACAGCAACATTGAGCAGGGCTCCGCCTTCTGACCGCTTGGTACCAGTAGCCTTCTCCGTTGAAGGCCACTTAACTGGTTTCAGCTTGCCGTCGCCACTGTCACAATGTCTTATAGGACGTCGGAGGGTTTCAACTTATGGACCAGTTTGCTCCCCTGTAGACTCGGACAACAAGCGAGGAGACACTACTATTCTTTTCGAAGGCTGCGACTACGAGCACTGGCTTATTACAATGGAATTTCCTGATCCTCAGCCCACCCGTGAGGAAAAGATTGATACGTTTATAAAAACCCTAGCGAAGGTGGTCGGAAGTGAAGAGGAAGCTAAAAAAAGGATTTATGCTTTGTCTACAACAACCTATACGGGGTTTCAGGCCCAGATATCAGAGGAACTCTCCGAAAAAATGAAGGGCCTGCCGGGCGTTGTCTGGGTGTTGCCTGATTCATATATTGATCCTGTAAATAAGGAGTATGGAGGAGATAAGTACATCAATGGGGTAATTATACCAGACACTCGGGTATATAATAACAGGTCTAGTGGAAGGTACAATGACAGGCCAAGAAACCGCAATCGCAGAGATTCCATGCCTGTTGAACGAAGAGACCCAATGCCCATGGATGGGAGGGGTGGTATGCAGGGAGATAGGAGAGATTTCAGGCCACCTCTGGAAGGAAGAGGTCCAATGCCAGGTGGTCAACAAGATTACAACAGACCTCAACAAGATTACAACCGACCTCAAGATTACAACAGACCTCCCCCTCAAGGTCCATTTCCAACTGATCGACAGGATTACAACAGGCCGCCTCCACCTCCGCCTATGGAGGGAAGAGGCCCAGTGCCAGGTGGACCTCAAGATTATAACAGGCCTCCTCAGTGA___CAGAACAGCAATGGAATTCGGAGGTGTTGAGAAGGTAATAGGTAAAGTTTGAGTCTGAATAGAGTGAGGAAATCCTTACTTAACGTGTAGCTCAAGCCGCCTTGGTGATTGTTTTTCGGGTTTAAAATTGTCATGCATGGCAAGGTGAATGGAATTTTTGATGGATTTTATTTGACCATGTAAGATTTTCTCACCGTCTGCCTGGTTTCAAATTCCATCCTTTTTTACTTTGTAAATTTTAAGGACAGTTGATTTATGAGGTGGTAGGTGGATGGCATTTCGCTTCACTTTGATTCCAAAATATCTTGTAGGACTTTTAGGTTTAGAATGGACGATGATCCAATGAATAGATAGTAGTATAAGAAACACTTGGCTTGATATTTATGGATTTATCGGTTTATGGATTTTAACTATTTGTATTAGAGGTGTATTTATTGAATCGAGATATACAATGCAATAATAACACCTTCTATAT

Fln Alignment:

sp_v1.1_unigene90629___AFSTA--TLSRAPPSDRLVPVAFSVE-----GHLTGFSLPSPLSQCLIGRRRVSTYGPVCSPVDSDNKRGDTTILFEGCDYEHWLITMEFPDPQPTREEKIDTFIKTLAKVVGSEEEAKKRIYALSTTTYTGFQAQISEELSEKMKGLPGVVWVLPDSYIDPVNKEYG-GDKYINGVIIPDTRVYNNRSSGXXXXXXXXXXXXXSMPVE------------XXXXXXXXXXXXXXXXXXXFRP---------------PLEGRG----------PMPGGQQDYNRP----------QQDYNRP-----------QDYNRPP--PQGPFPTDRQDY
A9NVN0_______________AFSTASSTISAHSSSPALLPKSSSSPVLSGYGHLCGFNRPSPPSRCMIVRCRVSNSGSVYSPLDS-NDSGRRESLFPGCDYEHWLVTMEFPDPQTTREQKIDTFVKTLANVVGSEEEAKKRIYALSTTTYTGFMCEISEELSEKIKKEPGVEWVLPDSYGDPIKKEYGVGDKYINGVIIPDTRVY-NRPTG---RDRPRNRRRDSMPIERRDVQTSRDPLPTLGGRDNIQGNSVPGDQRDFRPTESRDSMQGGQRVYRPMDGRATVAGDRQDYRPLPGDRQDYRPPVDARGPVPGYRQDYRPPVDARGPMPGYQQDY-RPPVDARGPFPGNQQDY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain