SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90626

Length: 529 nt

UniGene Fasta

>sp_v1.1_unigene90626
GAATATTTGATGAACATTATCATGTTTTATGAGACTCATAAGGAAAGGAAGAGTATGCTACTTTTGAATCCCGTGGCGGCTCGATTCGGAAGTATACTCTGAACTAGCTTGCGCGTTTCTTGACTGGACAGTTGGATCCAGGGCTCTTCAACTCACAGAAAAGTATTCGAGCCTTTTGTTGACGTTCTTAGCGGGGAAAGTTGAATGGAGTTGCAACTAAAATTGCAGCGATGGCTGTTCTTGATTATGTATGTATTCTTTGGCATAGCTGTCCAAATTAGTGGAGGTCCGGCGGAGGATTTAATTGGTAGACTGCCTGGTCAGCCAAAAGTAAATTTCAAACAATATGCTGGATACATCACGGTCGATGAGCACGCTGGCCGCGCATTGTTTTATTATTTTGCTGAAGCAGAGAATGATTCGGACTCAAAGCCCATTGCTTTATGGTTAAATGGAGGTCCGGGCTGTTCTTCACTTGGGGGTGGTGCATTTACGGAGCTAGGCCCGTTTTATCCACAAGGCAATGGCC

Ace file of the UniGene sp_v1.1_unigene90626

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine carboxypeptidase-like enzyme n=2 Tax=Selaginella moellendorffii RepID=D8QZ16_SELML	-	-	5.0e-26	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	serine carboxypeptidase-like enzyme	-	-	7.16064e-43	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NX75

Fln msg: Distance to subject end: 361 aas, your sequence is shorter than subject: 108 - 469

Fln protein: MELQLKLQRWLFLIMYVFFGIAVQISGGPAEDLIGRLPGQPKVNFKQYAGYITVDEHAGRALFYYFAEAENDSDSKPIALWLNGGPGCSSLGGGAFTELGPFYPQGNG

Protein Length: 109

Fln nts: GAATATTTGATGAACATTATCATGTTTTATGAGACTCATAAGGAAAGGAAGAGTATGCTACTTTTGAATCCCGTGGCGGCTCGATTCGGAAGTATACTCTGAACTAGCTTGCGCGTTTCTTGACTGGACAGTTGGATCCAGGGCTCTTCAACTCACAGAAAAGTATTCGAGCCTTTTGTTGACGTTCTTAGCGGGGAAAGTTGA_-_ATGGAGTTGCAACTAAAATTGCAGCGATGGCTGTTCTTGATTATGTATGTATTCTTTGGCATAGCTGTCCAAATTAGTGGAGGTCCGGCGGAGGATTTAATTGGTAGACTGCCTGGTCAGCCAAAAGTAAATTTCAAACAATATGCTGGATACATCACGGTCGATGAGCACGCTGGCCGCGCATTGTTTTATTATTTTGCTGAAGCAGAGAATGATTCGGACTCAAAGCCCATTGCTTTATGGTTAAATGGAGGTCCGGGCTGTTCTTCACTTGGGGGTGGTGCATTTACGGAGCTAGGCCCGTTTTATCCACAAGGCAATGGCC

Fln Alignment:

sp_v1.1_unigene90626___MELQLKLQRWLFLIMYVFFGIAVQISGGPAEDLIGRLPGQPKVNFKQYAGYITVDEHAGRALFYYFAEAENDSDSKPIALWLNXXXXXXXXXXXAFTELGPFYPQGNG
A9NX75_______________MDVQPKLQRWLCLVMYILFGIAVQISGGPAEDLIDRLPGQPKVNFKQYAGYITVDEHAGRALFYYFAEAEDDSDSKPVALWLNGGPGCSSVGGGAFTELGPFYPRDDG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain