SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90624

Length: 230 nt

UniGene Fasta

>sp_v1.1_unigene90624
TACCTTCGTGGATTACAATTAAGAATTTAAGGGTTTTGAAAGTGGAGGGCGCTGTATTGAAAACATTATGGCAAGGCATATCGCAGGCACCTTTGCAGTTGCAGGAATTGGACCTGTCTTCGTGCACTCAATTGAAGAGGCTACCAAATTCTTTCGGCAGCTTGTCAAACCTCCATAGGTTGGACCTGTCTCGATGCTGCGAATTGGAGAGGCTGCCAGATTCTTTCGGC

Ace file of the UniGene sp_v1.1_unigene90624

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA	-	-	5.0e-09	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	unknown [Picea sitchensis]	-	-	2.49848e-12	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ABF9

Fln msg: Distance to subject end: 179 aas, your sequence is shorter than subject: 76 - 392

Fln protein: PSWITIKNLRVLKVEGAVLKTLWQGISQAPLQLQELDLSSCTQLKRLPNSFGSLSNLHRLDLSRCCELERLPDSFG

Protein Length: 77

Fln nts: TACCTTCGTGGATTACAATTAAGAATTTAAGGGTTTTGAAAGTGGAGGGCGCTGTATTGAAAACATTATGGCAAGGCATATCGCAGGCACCTTTGCAGTTGCAGGAATTGGACCTGTCTTCGTGCACTCAATTGAAGAGGCTACCAAATTCTTTCGGCAGCTTGTCAAACCTCCATAGGTTGGACCTGTCTCGATGCTGCGAATTGGAGAGGCTGCCAGATTCTTTCGGC

Fln Alignment:

sp_v1.1_unigene90624___PSWITIKNLRVLKVEGAVLKTLWQGISQAPLQLQELDLSSCTQLKRLPNSFGSLSNLHRLDLSRCCELERLPDSFG
D5ABF9_______________PSWISMMKLRVLEMEGWNSKKWWQKESQPPLQLRELRIYSSETLRSLPDFFGKLANLQHLSLSHLGSLEMLPDSLG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain