SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90609

Length: 422 nt

UniGene Fasta

>sp_v1.1_unigene90609
GGAGTCCTGCGAATGTGGTGCAACCGTTAGTGGGGAGGTTTGGTCACGAGAAATCTCCTCTCTTCTTTTCATGGTTTAATAAATAGTTTCTGTATTAATAGTTTCTGTATTAATTTGTGCAGGAGCCCACACTGTGGGATTCACCCACTGCAAGGAGTTCCTGCACCGCATATACACCTACAACAGGACCACTCACATCGATCCGACTATGAATTTCCAGTACGCAATGGGTTTGAGAAGAGCATGCCCTCGAGCAAATCTAGACCCCACCATTGTCGTCTTCAACGATGTTAATTCTCCCAAGACATTTGACAATGGCTTCTACAGAAACTTGCCACAGGGTTTGGGTTTGCTTGCCTCGGATCAGATACTTTACACGGATCCCCGTTCCAGGGTTCTTGCCCAACGCTATGCGTCTGACC

Ace file of the UniGene sp_v1.1_unigene90609

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Peroxidase 16 precursor, putative (EC:1.11.1.7); K00430 peroxidase [EC:1.11.1.7]	-	-	2.0e-24	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	peroxidase 65 precursor	-	-	0.0	71%

Source	ECs	Term	Type	e value	Identity
AutoFact	Peroxidase.	EC:1.11.1.7	-	2.0e-24	50%

Source	KEGGs	Term	e value	Identity
AutoFact	Phenylalanine metabolism	00360	2.0e-24	50%
AutoFact	Methane metabolism	00680	2.0e-24	50%
AutoFact	Phenylpropanoid biosynthesis	00940	2.0e-24	50%
AutoFact	Biosynthesis of phenylpropanoids	01061	2.0e-24	50%
AutoFact	Metabolic pathways	01100	2.0e-24	50%
AutoFact	Biosynthesis of secondary metabolites	01110	2.0e-24	50%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	71%
Blast2go	cytoplasm	GO:0005737	Cellular Component	0.0	71%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AAS6

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 36 aas, your sequence is shorter than subject: 140 - 334

Fln protein: ESCECGATVSGEVWSREISSLLFMV**IVSVLIVSVLICAGAHTVGFTHCKEFLHRIYTYNRTTHIDPTMNFQYAMGLRRACPRANLDPTIVVFNDVNSPKTFDNGFYRNLPQGLGLLASDQILYTDPRSRVLAQRYASD

Protein Length: 141

Fln nts: GGAGTCCTGCGAATGTGGTGCAACCGTTAGTGGGGAGGTTTGGTCACGAGAAATCTCCTCTCTTCTTTTCATGGTTTAATAAATAGTTTCTGTATTAATAGTTTCTGTATTAATTTGTGCAGGAGCCCACACTGTGGGATTCACCCACTGCAAGGAGTTCCTGCACCGCATATACACCTACAACAGGACCACTCACATCGATCCGACTATGAATTTCCAGTACGCAATGGGTTTGAGAAGAGCATGCCCTCGAGCAAATCTAGACCCCACCATTGTCGTCTTCAACGATGTTAATTCTCCCAAGACATTTGACAATGGCTTCTACAGAAACTTGCCACAGGGTTTGGGTTTGCTTGCCTCGGATCAGATACTTTACACGGATCCCCGTTCCAGGGTTCTTGCCCAACGCTATGCGTCTGACC

Fln Alignment:

sp_v1.1_unigene90609___AGAHTVGFTHCKEFLHRIYTYNRTTHIDPTMNFQYAMGLRRACPRANLDPTIVVFNDVNSPKTFDNGFYRNLPQGLGLLASDQILYTDPRSRVLAQRYASD
D5AAS6_______________SGAHTVGFTHCKEFLHRIYSYNMTTHIDPTMNFQYAMALRRACPRVNLDPTIVVFNDVNSPRQFDNGFYRNLPQGLGLLGSDQILYTDPRSRVLAQRYASD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain