SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90601

Length: 1220 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90601

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	1(10),5-germacradien-4-ol synthase n=1 Tax=Pinus sylvestris RepID=B4XAK5_PINSY	-	-	86%
FL-Next	tr=1(10),5-germacradien-4-ol synthase; Pinus sylvestris (Scots pine).	-	-	86%
Blast2go	longifolene synthase	-	-	77%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B4XAK5

Fln msg: your sequence is shorter than subject: 340 - 625

Fln protein: EQNYSWLKSNINQKILELAKLDFNILQCTHIKEMQHISRWWAESYLPQLNFYRKPHVELYFWAVLSTFEPEFCSSRIAFTKLSTVMTVIDDLYDTHGTLDEIKIFTEAVRRWDSSLIGRLPDHIKKVFEFFMNTSNEWTAEVEKMQGRDMAAYILKNGWERYLESYLQEAEWIATGYVPSFNEYLKNGLASTGMCVLNLIPLLLMDQILPDDILKQIVYPSKIHDLLELTIRVKDDITDFEQEKERGEVASSLECYVKDNPECTREDALNHMKGIMDLSVSQLNWEFLKHDNVPLCCKRFTFNLARGMQFLFKYKDFVSISDKEVKDQILKVLVEPVQL*

Protein Length: 341

Fln nts: TGAACAAAACTATTCATGGCTCAAGTCTAATATAAACCAGAAAATTTTAGAGTTGGCGAAATTGGACTTCAATATTCTGCAATGCACACATATTAAAGAGATGCAACATATCTCGAGGTGGTGGGCAGAGTCATATCTGCCGCAGCTGAATTTCTATAGGAAACCCCACGTGGAACTTTACTTTTGGGCGGTTCTGAGCACATTCGAGCCCGAATTTTGCAGCAGCAGAATCGCCTTCACAAAACTTTCAACAGTGATGACGGTTATAGATGACCTATATGATACTCACGGAACATTGGACGAAATCAAAATCTTCACTGAGGCAGTGAGAAGATGGGATAGTTCGTTAATAGGCCGCCTTCCAGACCACATTAAAAAAGTATTCGAGTTCTTCATGAATACATCCAATGAATGGACTGCTGAAGTGGAAAAGATGCAAGGGCGGGATATGGCAGCGTACATACTAAAGAATGGCTGGGAGCGATACCTTGAGTCTTATCTGCAAGAAGCGGAATGGATAGCTACCGGATATGTTCCCTCGTTTAATGAATACTTGAAAAATGGTCTCGCTAGCACAGGGATGTGTGTCTTAAATTTGATTCCGCTTCTGTTAATGGATCAAATTCTACCAGACGACATTCTGAAGCAAATAGTCTATCCATCCAAGATCCATGATCTGTTAGAACTGACGATCCGAGTCAAGGACGACATAACGGACTTTGAGCAAGAGAAGGAACGTGGGGAGGTAGCTTCAAGTTTAGAGTGTTATGTGAAAGACAATCCCGAATGTACCCGTGAAGATGCTTTAAATCATATGAAAGGCATCATGGATCTTTCTGTCAGCCAACTGAATTGGGAATTTCTAAAACATGACAATGTGCCGCTGTGCTGCAAAAGGTTTACTTTCAATCTTGCACGAGGCATGCAGTTCCTCTTCAAATACAAAGATTTCGTATCCATTTCTGACAAAGAGGTAAAGGACCAAATACTCAAAGTCCTTGTAGAGCCAGTGCAGCTCTGA___ATATTATAGTCATGGCTCATAGCCTTGTTAATTGCGCAGAGAGGTTTACATGTGATGGTCTTATATTGTGTGACTGCTATACTCCATGTGAGTATAAATGTCTCTCAAAATATTCCATGTTTCTTGGTCTAATAAAACTTGTCCTACCATCGACTTGGTCTAAGGGCGCAAAGTCTGACCAACCCTTTATATTCTTAAC

Fln Alignment:

sp_v1.1_unigene90601___EQNYSWLKSNINQKILELAKLDFNILQCTHIKEMQHISRWWAESYLPQLNFYRKPHVELYFWAVLSTFEPEFCSSRIAFTKLSTVMTVIDDLYDTHGTLDEIKIFTEAVRRWDSSLIGRLPDHIKKVFEFFMNTSNEWTAEVEKMQGRDMAAYILKNGWERYLESYLQEAEWIATGYVPSFNEYLKNGLASTGMCVLNLIPLLLMDQILPDDILKQIVYPSKIHDLLELTIRVKDDITDFEQEKERGEVASSLECYVKDNPECTREDALNHMKGIMDLSVSQLNWEFLKHDNVPLCCKRFTFNLARGMQFLFKYKDFVSISDKEVKDQILKVLVEPVQ
B4XAK5_______________EQNYSWLKSIMNQKILELAKLDFNILQCTHKEEMQLISRWRSESYLPQLDFYRKRHVELYFWAVLGTFEPEFRSSRIAFTKLSTVMTVIDDLYDTHGTLDEIKIFTEGVRRWDTSLISRLPDHIQKIFEFFMKTSNEWTAEVEKKQGRDMAAYIRKNGWERYVESYLQEGEWMAAGYVPSFNEYYKNGLASSGMCVLNLIPLLLMDQILPDDILKQIVYPSKIHELLELTIRVKDDITDFEKEKEHGQVASCSECYMKDNPECTREDALNHMKGILDLSVSQLNWEFLKHDNVPLCYKRFTFNLARGMHFLFKYNDGITLSDNEVKDQIFKVLIQPLQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain