SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90266

Length: 549 nt

UniGene Fasta

>sp_v1.1_unigene90266
GGCTGGACATGGTCAAAGTGTTATTTGAACAACTTCTTGCCACAGAGGGGGACTCTTTGAGAGATCCTGCTTCACTGGCATATCAGCAAGTTTTTGCTCCACACCATGGGTGGGCTATTAGAAAGGCTGTTGGCGCTGGAATGTATTCCCTTCCAACAAAATCACAGTTTTTAAAGAAGCTAAATGAAGATGAGGCATCTGCTAGAGTGCACATGCAAAACTATGTAGACACATCAGCACCTGTTATACAATACGTTGACAACCTCTTCCATTCAAGGAATTTAGGTACAGATTGGTGAGTTCTTCCTCCACTGGACTTAGAGGAAGTGCCTGCAGAAATGTTAACACTAGACTTTATGTACTTGCTATAATACAATTGCTAAAGTCTTACAGCAATAATCACTGCAAGTCCCTTGATCCAGAATTTGGAATGATATTTGGAAAGATAAAGAGTTTAACTGGCATACAATTATTAGTAGTTTGCTTAAACTCAACATTTGTGGCTTCAAAAAATTTCATGAGAGGAATAAAGCTATAAGCTGGTTGACG

Ace file of the UniGene sp_v1.1_unigene90266

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ACD11; ACD11 (ACCELERATED CELL DEATH 11); sphingosine transmembrane transporter	-	-	2.0e-33	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Blast2go	protein	-	-	4.55436e-38	83%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salicylic acid stimulus	GO:0009751	Biological Process	4.55436e-38	83%
Blast2go	cell death	GO:0008219	Biological Process	4.55436e-38	83%
Blast2go	defense response to bacterium, incompatible interaction	GO:0009816	Biological Process	4.55436e-38	83%
Blast2go	sphingosine transmembrane transporter activity	GO:0010175	Molecular Function	4.55436e-38	83%
Blast2go	protein binding	GO:0005515	Molecular Function	4.55436e-38	83%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ACB1

Fln msg: your sequence is shorter than subject: 99 - 203

Fln protein: LDMVKVLFEQLLATEGDSLRDPASLAYQQVFAPHHGWAIRKAVGAGMYSLPTKSQFLKKLNEDEASARVHMQNYVDTSAPVIQYVDNLFHSRNLGTDW*

Protein Length: 100

Fln nts: GGCTGGACATGGTCAAAGTGTTATTTGAACAACTTCTTGCCACAGAGGGGGACTCTTTGAGAGATCCTGCTTCACTGGCATATCAGCAAGTTTTTGCTCCACACCATGGGTGGGCTATTAGAAAGGCTGTTGGCGCTGGAATGTATTCCCTTCCAACAAAATCACAGTTTTTAAAGAAGCTAAATGAAGATGAGGCATCTGCTAGAGTGCACATGCAAAACTATGTAGACACATCAGCACCTGTTATACAATACGTTGACAACCTCTTCCATTCAAGGAATTTAGGTACAGATTGGTGA___GTTCTTCCTCCACTGGACTTAGAGGAAGTGCCTGCAGAAATGTTAACACTAGACTTTATGTACTTGCTATAATACAATTGCTAAAGTCTTACAGCAATAATCACTGCAAGTCCCTTGATCCAGAATTTGGAATGATATTTGGAAAGATAAAGAGTTTAACTGGCATACAATTATTAGTAGTTTGCTTAAACTCAACATTTGTGGCTTCAAAAAATTTCATGAGAGGAATAAAGCTATAAGCTGGTTGACG

Fln Alignment:

sp_v1.1_unigene90266___LDMVKVLFEQLLATEGDSLRDPASLAYQQVFAPHHGWAIRKAVGAGMYSLPTKSQFLKKLNEDEASARVHMQNYVDTSAPVIQYVDNLFHSRNL
D5ACB1_______________LDMVKVLFERLLVTRGSSLRDPASVAYAQVLAPHHGWAIRKVVAAGMYTLPTKSQLLKKLNEDEASARVDMQKYINASASILQYVNNLFLSRNL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain