SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90239

Length: 1458 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90239

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	structural constituent of ribosome, putative	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein	-	-	83%

Source	GOs	Term	Type	e value	Identity
Blast2go	intracellular	GO:0005622	Cellular Component	0.0	83%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZ46

Fln msg:

Fln protein: MFKRLLRDIWNKGENKLSRNHLDVFSVLAREFHSGKELCGPRSFFGVEDFVDDDNTKPYTYRKEKISKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAVGRILADRSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN*

Protein Length: 188

Fln nts: GGATAAGGAGAATTCGCTAAGGCGTGGAAAAAGCATTGTAAAAGCCTAAGAATGTAGAAGAGTGTGGATTTGCTCTGTATTCTCAAAATCAAGGAAAATGGCAAATTGTTAGCGGCTATTCAGTCGAATTCGTCATTATGGGAGTTATTGGAACTTAGACCTAGAGGCAATCAGAAAATTGGAATGCATAATCGATACTAGGGGTTTTTCATTCTAGTCCTGCTATCCGACCACCACCTCTCGTCTCGGCCTGGATTTTTCTTCCATAGATGGGCTGAGCAAAGGGGTCTCGTCTTCATTTATTCAATTTGGATTTGGCAGAAGGGCTCAATGTATCAAGTGGGAGGAGGTTTGGATCGTCACTGGCCGTGTCAGGGCTAGTAGAGGGTCCAATATTTCAAAGGTGTGTCTACAATGATATGTTGAGGCTCAGAGCATAGGAGAAAAACGATTCTGTCGTCAAGGTTTACCAGAGTGCAAA_-_ATGTTCAAGCGGTTACTCAGAGATATATGGAATAAAGGGGAGAATAAATTAAGCAGAAATCATTTAGATGTCTTTTCTGTCCTTGCAAGAGAGTTCCACAGTGGAAAGGAATTATGTGGACCTAGAAGCTTTTTTGGCGTGGAGGATTTTGTAGATGATGACAACACTAAACCATACACATATAGGAAGGAGAAAATATCAAAAAACCCACATAAGCATGTATCTTTCAAGCAACGAACAATTGCCTATATGCAGCCCTTTACACTGGATGTCTTCATATCAAAGCGCTTTGTTAGTGCATCAATTACCCACAGGGTCACGAGCAAGCAGGTGGCAGTTGCAGGTACAAATTCTAAAGACATAAAAGCTGCATTGAGGTCTAAGTCAGATATTCCTGCTTGTTTGGCAGTTGGTCGAATCTTAGCTGATCGATCAAGAGAGGCAGATGTATACACTGCGGTATATACTCCCAGAGAAAGGGACAAATTTGAAGGAAAAATAAGAGCTGTGGTCCAATCTCTCATAGATAATGGTATTGATATCAAAGTATATTTAAATTAA___CTTAGGAATATCCATATCGCTACATCTCAATTTAAGGCCCTGCTCAGCATCTTCTACTGATTATGTGTGCACCTGTTTATGTGTGAATATTTCAGGAGTTCTGTAAAAAACGTTGAGAGCCATACGTGTGACAATTGTTATATCTTTGTGCCTATATTTTAAATTAGGGGTGTTGTAAGCCATTATTTTATAATTTATTGCCTAGCTGGAACATTTATTGAAAGCTATGCATTTAAAGTTTAAACAATGTGCTACTATTCACATTCACGAGGCAAATTGTTTTCATTTGCCCGTTATGGTTTGATAGAGGCAGTGCATCACAGGTAAATGATCCTTTTGCTACTTCCGGAAATTTTTGTTTTCTTTTTAGTTGTGCAATAAAGCGAGGACGAAATCAGTTTTCTAGTGGATCTAAA

Fln Alignment:

sp_v1.1_unigene90239___MFKRLLRDIWNKGENKLSRNHLDVFSVLAREFHSGKELCGPRSFFGVEDFVDDDNTKPYTYRKEKISKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAVGRILADRSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN
A9NZ46_______________MFKLLLRDIWNKGEHTLSRSHLDVFSVLAREIHSGKELCGPRSFFGVEDFVDDDNSKPYTYMKEKKSKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain