SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90192

Length: 893 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene90192 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative (EC:2.4.1.207); K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	88%
Blast2go	xyloglucan endo-transglycosylase	-	-	75%

Source	ECs	Term	Type	e value	Identity
AutoFact	Xyloglucan:xyloglucosyl transferase.	EC:2.4.1.207	-	0.0	62%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NN79

Fln msg:

Fln protein: MYDCKRQNTIKPFTGHFHALLVVAFVLMVSVCPNADHIPVSEAARRGHKGRYPRASQFPTVKFNRGFHVLWGPQHQTIWNDQSGITIWLDRNSGSGFKSLRPYKSGYFSAAIKLQAGYTAGVNTAFYLSNNEAHRDYHDEIDIEFLGNIQGRPYTLQTNIYVRSGNAGRGRIITGREQQIHLWFDPTKDFHRYSILWTPLKIIFFVDDIPIRKYRRTNPYTFPARPMWLYGSIWDASPWATDNGKYKVDYNYQPFVAQYRGFVLA*

Protein Length: 267

Fln nts: TTTCCAATCACTTCACTTGCAGCAGCTGATCATCTGAGGAAACTGGCCGCAGCAGCA_-_ATGTATGACTGCAAGCGCCAGAACACCATTAAGCCATTCACGGGCCATTTTCATGCCTTGCTAGTGGTTGCATTTGTCCTCATGGTTTCAGTTTGTCCAAATGCTGATCATATTCCAGTATCAGAAGCAGCGAGAAGGGGTCACAAAGGCAGATATCCTCGAGCTTCTCAGTTTCCTACTGTGAAGTTTAATAGAGGTTTCCATGTTCTCTGGGGTCCCCAGCACCAAACAATCTGGAATGATCAGTCTGGAATAACCATTTGGCTCGACAGGAACTCGGGAAGCGGATTTAAATCGCTGAGACCGTACAAGTCTGGCTACTTCAGTGCAGCCATTAAGTTGCAGGCTGGGTATACTGCAGGAGTCAATACTGCCTTTTATTTATCGAACAACGAGGCTCACCGGGACTACCACGATGAAATAGACATTGAATTTCTAGGAAATATCCAGGGAAGACCTTATACCTTACAGACCAACATTTATGTAAGATCTGGAAATGCCGGAAGAGGGAGGATTATTACAGGAAGAGAGCAGCAAATCCACCTCTGGTTTGATCCCACTAAGGATTTTCACCGTTACAGCATTCTCTGGACTCCATTGAAGATTATATTTTTTGTGGATGACATCCCAATAAGAAAGTATCGAAGGACGAACCCTTACACTTTCCCAGCAAGGCCCATGTGGCTGTACGGATCGATCTGGGATGCATCTCCTTGGGCTACAGATAACGGGAAATACAAGGTCGACTACAATTACCAACCATTCGTCGCCCAGTACAGAGGCTTTGTCCTCGCGTAG___TGCACGGAATCGAAGGCGGTCGCAAGCTCCGGGAAAAA

Fln Alignment:

sp_v1.1_unigene90192___MYDCKRQNTIKPFTGHFHALLVVAFVLMVSVCPNADHIPVSEAARRGHKGRYPRASQFPTVKFNRGFHVLWGPQHQTIWNDQSGITIWLDRNSGSGFKSLRPYKSGYFSAAIKLQAGYTAGVNTAFYLSNNEAHRDYHDEIDIEFLGNIQGRPYTLQTNIYVRSGNAGRGRIITGREQQIHLWFDPTKDFHRYSILWTPLKIIFFVDDIPIRKYRRTNPYTFPARPMWLYGSIWDASPWATDNGKYKVDYNYQPFVAQYRGFVL
A9NN79_______________MYDCKRQNAIKPLTGQLHALLVLAFVLLVSVSAYADEFPVSEAASRGHRGRYLRASQFSPVQFNRGFRVLWGPQHQTVSNDQSGITIWLDRNSGSGFKSLRPYKSGYFSAAIKLQAGYTAGVNTAFYLSNNEAHRDYHDEIDIEFLGTIPGRPYTLQTNIYVRAGNAGTGRIITGREQQIHLWFDPTKDFHRYSILWTPFKIVFFVDDIPIRKYRRTNPYTFPARPMWLYGSIWDASSWATDNGKYKVDYKYQPFVAMYRSFVL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain