SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90125

Length: 1435 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90125

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	leucine-rich repeat family protein	-	-	4.2039e-45	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	protein	-	-	0.0	75%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVZ4

Fln msg:

Fln protein: MEKAWEKAVEAARGGQNPSEIVSLTLDGALKGTPCRLPPAALFEQFPRLQQLSLASAGLTSLEGFPSLPHLKRLVLSDNKISGGLEHLVQAGLKSLEDLDLSNNRIHVLEDLVPLSQFNLVSLDLYECPVTRLPEYRARVFDIIKSLEFLDKTDVEGGERLESDDEGEEVDSEDEDAEDVDNYTSEDKSNGVRSLNPSGDQDEDEFEQEDEEDELDVDEDDEYQDGVTINGHGVAPGHMAANAAGNSSDDDEVDDEDECENAEVQDLDDDVDEDSDEVVAEADDDDAGAAEDDEDDGATEHASSAPGELDVQDDDDNADDEDGELGDEEEDDEGVENDAEDDGEDEQEEDYGTEYLVQPIGKPEDEDGGSDFEPVEDGADDNYVAGNPAGNQKRSRDEIDSDSEDEERNPKRR*

Protein Length: 415

Fln nts: TTTTGAAGCTTCTGCCCTCCGAGGCTGGAATCTGCAGTTTTAATGAACTCGAACTGTGGGAAAGCTTGTGCTTGCTTAGTATGGCTTCAGGATAAAGTGATTTAGTTGGGAAAAGCAGTTTATTCTTGTGTTTTGAGTGGGTGGGTTTGAACTTCTTGTGGAAGCTTGAATTGCAAGAAAG_-_ATGGAAAAAGCATGGGAAAAGGCAGTTGAGGCTGCTAGAGGCGGACAGAACCCTTCAGAAATCGTTTCTTTAACCCTAGACGGTGCCCTTAAAGGTACGCCGTGCAGGTTGCCTCCTGCGGCTTTGTTTGAGCAGTTTCCACGGCTCCAGCAGCTGTCATTAGCCAGCGCTGGCCTGACTTCTCTGGAAGGGTTTCCATCCTTGCCTCATTTAAAACGTCTTGTTCTTAGCGACAACAAGATCTCCGGCGGCCTCGAACATCTGGTGCAAGCGGGGCTTAAATCTCTGGAGGATCTCGATCTGTCGAATAATAGAATACATGTATTGGAGGATCTTGTTCCGTTGTCACAGTTTAACCTTGTGTCTTTGGACCTGTACGAGTGCCCCGTGACGCGGCTGCCAGAGTACAGAGCTAGGGTTTTCGACATCATCAAATCCCTAGAGTTTCTGGACAAGACGGACGTTGAAGGGGGCGAGAGACTTGAATCCGACGATGAAGGCGAGGAAGTGGATTCGGAAGATGAAGATGCGGAGGATGTTGATAATTATACCAGTGAAGACAAGTCCAACGGCGTTCGATCTCTGAACCCATCGGGTGACCAGGACGAGGACGAATTTGAGCAGGAGGATGAGGAGGACGAGCTTGATGTGGATGAGGATGATGAGTATCAAGATGGGGTAACCATTAATGGCCACGGTGTAGCGCCTGGTCATATGGCTGCCAATGCTGCCGGTAATAGCTCGGATGATGATGAGGTGGATGATGAAGATGAGTGCGAGAATGCTGAGGTCCAGGATTTGGACGACGATGTCGATGAAGATAGCGATGAGGTTGTAGCTGAAGCCGACGATGACGATGCCGGTGCTGCAGAAGATGATGAAGATGATGGTGCCACTGAACATGCAAGTAGTGCCCCTGGAGAACTTGATGTTCAAGACGACGATGATAATGCAGACGATGAGGATGGGGAGCTAGGGGATGAAGAAGAAGACGATGAAGGAGTTGAGAACGATGCCGAAGACGATGGCGAAGATGAGCAGGAAGAAGACTATGGTACGGAGTACTTGGTACAGCCTATTGGTAAGCCCGAAGATGAGGACGGTGGTAGTGATTTTGAACCGGTTGAAGATGGTGCTGATGACAATTACGTTGCTGGAAACCCTGCTGGAAACCAGAAGAGGAGTAGGGATGAAATAGATAGTGATTCGGAGGATGAAGAAAGAAATCCCAAGCGGCGATAA___ATATAAATTAAT

Fln Alignment:

sp_v1.1_unigene90125___MEKAWEKAVEAARGGQNPSEIVSLTLDGALKGTPCRLPPAALFEQFPRLQQLSLASAGLTSLEGFPSLPHLKRLVLSDNKISGGLEHLVQAGLKSLEDLDLSNNRIHVLEDLVPLSQFNLVSLDLYECPVTRLPEYRARVFDIIKSLEFLDKTDVEGGERLXXXXXXXXXXXXXXXXXXXXNYTSEDKSNGVRSLNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXGVTINGHGVAPGHMXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATEHASSAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTEYLVQPIGKPEDEDGGSDFEPVEDGA----------DDNYVAGNPAGNQKXXXXXXXXXXXXXXXNPKRR
A9NVZ4_______________MEKAWEKAVEAARGGQNPSEIVSLTLDGALKGTPCRLPPAALFEQFPRLQHLSLANAGLTSLEGFPSLPHLKRLVLSDNRISGGLEHLVQAGLKSLEDLDLSNNRIQVLEDLVPLSQFNLVSLDLYECPVTRLPEYRARVFDIIKSLEFLDKTDVEGGERLESDDEGEEVDSEDEEAEDVDNYTSEDKSNGVRSLNRPA-DQDEDDFEQEDEDELDVEEDEEYQDGVTINGHGVAPGHMAANAAGNSSDDDEVDDEDECENAEVQDLDDDGDEESDEVVAEADDDDAGAAEDDEDDGGTEHASSAPG-ELDVQDDDDNADDEDGELGDEEEDDEGVENDAEDDVEDEEEDYGTEYLVQPIGKPEDEDGGSDFEPVEDGAEDEDIDEDEDDDNYVAGNPAGNQKRSRDVIDSDSEDEERNHKRR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain