SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90118

Length: 350 nt

UniGene Fasta

>sp_v1.1_unigene90118
CTGGATGTGTGTCAAAACTTGCTAGTGGACTAGCAAAGTTAAGAGAGTTTTTGCAGACAGATTTAACCTCAAGACATCTAAATGATGAAGACAGGTCAGCTGAGGATATGGATACCACAGAAGATGGTTTCTATAAATCCATGGAATCTTTTGTAAAGCAAGCTGGGGAGAAAATTAACGAAATTCAGATTGAGGAATTAAGAGTGTTCTCTCTCGTTAAGAAAATCACCTTGTATTATCATGCCGAGGCAACCAGGGAAAATTCTCAACTTCTTCACATTTTTTTCATTGTAAGGGACTTTTTAGGCATACTTGATCGAGAATGCGGTGAAATTGGCAGAAACCTGAAA

Ace file of the UniGene sp_v1.1_unigene90118

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Formin-like (Fragment) n=3 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MDY9_PSEMZ	-	-	8.0e-16	51%
FL-Next	sp=Formin-like protein 6; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	41%
Blast2go	formin-like	-	-	1.41491e-15	62%

Source	GOs	Term	Type	e value	Identity
Blast2go	actin cytoskeleton organization	GO:0030036	Biological Process	1.41491e-15	62%
Blast2go	actin filament binding	GO:0051015	Molecular Function	1.41491e-15	62%
Blast2go	nucleolus	GO:0005730	Cellular Component	1.41491e-15	62%
Blast2go	phragmoplast	GO:0009524	Cellular Component	1.41491e-15	62%
Blast2go	plasma membrane	GO:0005886	Cellular Component	1.41491e-15	62%
Blast2go	cell wall	GO:0005618	Cellular Component	1.41491e-15	62%
Blast2go	spindle	GO:0005819	Cellular Component	1.41491e-15	62%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9FJX6

Fln msg: Distance to subject end: 46 aas, your sequence is shorter than subject: 116 - 899

Fln protein: GCVSKLASGLAKLREFLQTDLTSRHLNDEDRSAEDMDTTEDGFYKSMESFVKQAGEKINEIQIEELRVFSLVKKITLYYHAEATRENSQLLHIFFIVRDFLGILDRECGEIGRNLK

Protein Length: 117

Fln nts: CTGGATGTGTGTCAAAACTTGCTAGTGGACTAGCAAAGTTAAGAGAGTTTTTGCAGACAGATTTAACCTCAAGACATCTAAATGATGAAGACAGGTCAGCTGAGGATATGGATACCACAGAAGATGGTTTCTATAAATCCATGGAATCTTTTGTAAAGCAAGCTGGGGAGAAAATTAACGAAATTCAGATTGAGGAATTAAGAGTGTTCTCTCTCGTTAAGAAAATCACCTTGTATTATCATGCCGAGGCAACCAGGGAAAATTCTCAACTTCTTCACATTTTTTTCATTGTAAGGGACTTTTTAGGCATACTTGATCGAGAATGCGGTGAAATTGGCAGAAACCTGAAA

Fln Alignment:

sp_v1.1_unigene90118___VSKLASGLAKLREFLQTDLTSRHLNDEDRSAEDMDTTEDGFYKSMESFVKQAGEKINEIQIEELRVFSLVKKITLYYHAEATRENSQLLHIFFIVRDFLGILDRECGEI
Q9FJX6_______________VTKLEMGLDKLRSFLKTE-----------------TTQGRFFDSMKTFLKEAEEEIRKIKGGERKALSMVKEVTEYFHGNAAREEAHPLRIFMVVRDFLGVLDNVCKEV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain