SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90097

Length: 328 nt

UniGene Fasta

>sp_v1.1_unigene90097
GAAGGAAAAATGAAAGAGATAAAGGAGGATAGCCTTGCCCTGTTGAGGAAAGTGGAGCAGTATCTCCTTTCCAATCCCAACTTATACTGCTAAATATAGTTATCTATAGTTTAGAGCCGCCCGTTCACCGTGCAAAATAAAGAAGAGTGACTATATCACTTCCTCCCATCGTCATTGTCGTTTATGGGCTCTTTATCGTTAAGTGATTATCGTGTGTAATTCCGTGAATTCAAGTCAATTTCAACGTTCGTTCAGTATTGTGTTTTCAGAGCGAATTCGTCTTATTCACTTTTCAAATTACAACGACAGCAATCCCATTTTATACTAG

Ace file of the UniGene sp_v1.1_unigene90097

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Intracellular pathogenesis-related protein PinmIII n=15 Tax=Pinus monticola RepID=O81134_PINMO	-	-	4.0e-07	83%
FL-Next	tr=PR10 protein; Pinus monticola (Western white pine) (Strobus monticola).	-	-	0.0	93%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q7X9V7

Fln msg: your sequence is shorter than subject: 31 - 161

Fln protein: EGKMKEIKEDSLALLRKVEQYLLSNPNLYC*

Protein Length: 32

Fln nts: GAAGGAAAAATGAAAGAGATAAAGGAGGATAGCCTTGCCCTGTTGAGGAAAGTGGAGCAGTATCTCCTTTCCAATCCCAACTTATACTGCTAA___ATATAGTTATCTATAGTTTAGAGCCGCCCGTTCACCGTGCAAAATAAAGAAGAGTGACTATATCACTTCCTCCCATCGTCATTGTCGTTTATGGGCTCTTTATCGTTAAGTGATTATCGTGTGTAATTCCGTGAATTCAAGTCAATTTCAACGTTCGTTCAGTATTGTGTTTTCAGAGCGAATTCGTCTTATTCACTTTTCAAATTACAACGACAGCAATCCCATTTTATACTAG

Fln Alignment:

sp_v1.1_unigene90097___EGKMKEIKEDSLALLRKVEQYLLSNPNLYC
Q7X9V7_______________EGKIKEIKEDSLALLKKVEQYLLSNPNLYC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain