SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene89826

Length: 526 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v1.1_unigene89826
CCGTCATTGACGGGGCTCAACAGCCGGTACGGCGAAGCTTAACTTTTTCCGTTACAGAGCCTCTTCTGGCTTGCATACCTTCATAACAATCTCATGTCAGGCGGAGATTCCTCCATTTTGAATCCGGCGCTTGCAAAATGAGCTTTGGAGCGGCAATCGGGCGGCATTCAGGTCGCGGATCGCGTTGCGGGTGAGAAACGCTTCTTCTTCTCATCCTGCTCCTTCGAACGGTACCAGATGATCCCCGATTCGCCCTCTTTTGACCCATCTTTGCATGCATGCGCTAAATGCTGTGAAGGGGTAAAGGGGTTAGTGTCTAACTAGACACAGATCCTAGATGACTGTGGTTGGTACCACTTCTATTCGAGACACGGTAGAGCTGGATCATGGAGAGCTTTGCAACACCGTACCCAGTAGTTTTCTTTGATGGAGAGCAGGATCATGAAAAGGGTCATGTTGGCGTGCATTCGGCTCTCACATTCAAGCGTTTTCAAACTCTGATGAGTCAGAAAACTGGAATTCCTGG

Ace file of the UniGene sp_v1.1_unigene89826 (antisense)

If you push the Download ace button, you will download an ace file of this UniGene.

To watch this ACE file you will need an ACE viewer program as Tablet:

Go to the Tablet ACE viewer Web

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	82%
Blast2go	predicted protein [Physcomitrella patens subsp. patens]	-	-	1.4004e-14	91%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: tr_plants

Fln subject: A9S9N0

Fln msg: Distance to subject end: 425 aas, your sequence is shorter than subject: 46 - 472

Fln protein: MESFATPYPVVFFDGEQDHEKGHVGVHSALTFKRFQTLMSQKTGIP

Protein Length: 47

Fln nts: CCGTCATTGACGGGGCTCAACAGCCGGTACGGCGAAGCTTAACTTTTTCCGTTACAGAGCCTCTTCTGGCTTGCATACCTTCATAACAATCTCATGTCAGGCGGAGATTCCTCCATTTTGAATCCGGCGCTTGCAAAATGAGCTTTGGAGCGGCAATCGGGCGGCATTCAGGTCGCGGATCGCGTTGCGGGTGAGAAACGCTTCTTCTTCTCATCCTGCTCCTTCGAACGGTACCAGATGATCCCCGATTCGCCCTCTTTTGACCCATCTTTGCATGCATGCGCTAAATGCTGTGAAGGGGTAAAGGGGTTAGTGTCTAACTAGACACAGATCCTAGATGACTGTGGTTGGTACCACTTCTATTCGAGACACGGTAGAGCTGGATC_-_ATGGAGAGCTTTGCAACACCGTACCCAGTAGTTTTCTTTGATGGAGAGCAGGATCATGAAAAGGGTCATGTTGGCGTGCATTCGGCTCTCACATTCAAGCGTTTTCAAACTCTGATGAGTCAGAAAACTGGAATTCCTGG

Fln Alignment:

sp_v1.1_unigene89826___MESFATPYPVVFFDGEQDHEKGHVGVHSALTFKRFQTLMSQKTGIP
A9S9N0_______________MESFATPYPVVFCDGDQEHDKGVVGVHSVLSFKRFQALMSQKTGIP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain