SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene89760

Length: 514 nt

UniGene Fasta

>sp_v1.1_unigene89760
AAAGTACTTGCAGTCAATTCTAGAAAAAGCAAGGGAAACTCTTGCAGGTTACAACGTGGGGTCAATTGGATTGGAAGCTACTCGTGCAGAACTTTCTGAATTGGCCTCAAAAGTGAAAAATGAATGTTTTAATTCTACATTTTCTGCTTTGACCTTCTCCACGATGCCTGAAATCCCTGGTCTATTTCCAGAATCTCAGATTGCCCATCAGCAATCCCAGGCAGCAGACTGTTCTGCATATAGCTGCCTCACTTCAAATGAGAGTTCTGAGAAGAGTCCTACAGAGAATTTGCAGGCTGGTGGTAGAAAGCGCCCAAGGTCTGCTTATGATAACAAAGTGCAGTTTTGGCAGGATGAAATCAGAGAAGACATCAGGCTGCAAGAACTGACAGGAGAAGAAAATCTTTCTTCACCTTCCTCTAGGACCAAGGATTCGTCAATTGTATTTCATCATCATGAGAGGGCTAATAGTGACATAGTACAAGCAGAAGAAAATGGCAACCGTTTATCTGAC

Ace file of the UniGene sp_v1.1_unigene89760

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SHH4_RICCO	-	-	3.0e-16	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	44%
Blast2go	myb family transcription factor	-	-	9.12087e-29	55%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PPV3

Fln msg: Distance to subject end: 41 aas, your sequence is shorter than subject: 171 - 392

Fln protein: KYLQSILEKARETLAGYNVGSIGLEATRAELSELASKVKNECFNSTFSALTFSTMPEIPGLFPESQIAHQQSQAADCSAYSCLTSNESSEKSPTENLQAGGRKRPRSAYDNKVQFWQDEIREDIRLQELTGEENLSSPSSRTKDSSIVFHHHERANSDIVQAEENGNRLSD

Protein Length: 172

Fln nts: AAAGTACTTGCAGTCAATTCTAGAAAAAGCAAGGGAAACTCTTGCAGGTTACAACGTGGGGTCAATTGGATTGGAAGCTACTCGTGCAGAACTTTCTGAATTGGCCTCAAAAGTGAAAAATGAATGTTTTAATTCTACATTTTCTGCTTTGACCTTCTCCACGATGCCTGAAATCCCTGGTCTATTTCCAGAATCTCAGATTGCCCATCAGCAATCCCAGGCAGCAGACTGTTCTGCATATAGCTGCCTCACTTCAAATGAGAGTTCTGAGAAGAGTCCTACAGAGAATTTGCAGGCTGGTGGTAGAAAGCGCCCAAGGTCTGCTTATGATAACAAAGTGCAGTTTTGGCAGGATGAAATCAGAGAAGACATCAGGCTGCAAGAACTGACAGGAGAAGAAAATCTTTCTTCACCTTCCTCTAGGACCAAGGATTCGTCAATTGTATTTCATCATCATGAGAGGGCTAATAGTGACATAGTACAAGCAGAAGAAAATGGCAACCGTTTATCTGAC

Fln Alignment:

sp_v1.1_unigene89760___KYLQSILEKARETLAGYNVGSIGLEATRAELSELASKVKNECFNSTFSALTFSTMPEIPGLFPESQIAHQQSQAADCSAYSCLTSNESSEKSPTENLQAGGRKRPRSAY-DNKVQFWQDEIREDIRLQELTGE-----ENLSSPSSRTKDSSIVFHHHERANSD
C0PPV3_______________KYLQSILEKACQALTDQTIASAGLEAARQELSELAMKVSNGCLSSPFEDVNLPSLPEIPQIHVDESTLHQQTQLTDCSVDSCLTSNESTPKIPQEDMQAVRNKRSRPLYCDNDALVWDNDVRNDLRLQELSAACLSQVGNLNEEEQMPSVSPIESHSERNSMKD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain