SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene89715

Length: 283 nt

UniGene Fasta

>sp_v1.1_unigene89715
TATGTAAAAGCAGCGAGTCTGCCAGCGAGGCCTTCCAGCCTTGTCGGACCGCTCACCCAAACTGCGGGCGTACTCTTCTGCAAGAAAGGAGTGCGCTGCTAACTTGAACTTCTAACCCACTTACCAAGGTGGAGTTCAACTGACTAGTTATTATGGGAATGAAGCTTTTCTCTAATTTGTCTTACGCCATTTCAAAATTTCTGATAGGATGATAATCGACTCCATTTCGGAATGCACTGGAGGCGTAAAAGTTCTTCTTTTATTGTGATGGTAGGTAGGATGT

Ace file of the UniGene sp_v1.1_unigene89715

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable pectate lyase 18 n=3 Tax=Arabidopsis RepID=PLY18_ARATH	-	-	3.0e-05	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	81%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQ36

Fln msg: your sequence is shorter than subject: 34 - 426

Fln protein: YVKAASLPARPSSLVGPLTQTAGVLFCKKGVRC*

Protein Length: 35

Fln nts: TATGTAAAAGCAGCGAGTCTGCCAGCGAGGCCTTCCAGCCTTGTCGGACCGCTCACCCAAACTGCGGGCGTACTCTTCTGCAAGAAAGGAGTGCGCTGCTAA___CTTGAACTTCTAACCCACTTACCAAGGTGGAGTTCAACTGACTAGTTATTATGGGAATGAAGCTTTTCTCTAATTTGTCTTACGCCATTTCAAAATTTCTGATAGGATGATAATCGACTCCATTTCGGAATGCACTGGAGGCGTAAAAGTTCTTCTTTTATTGTGATGGTAGGTAGGATGT

Fln Alignment:

sp_v1.1_unigene89715___YVKAASLPARPSSLVGPLTQTAGVLFCKKGVRC
B8LQ36_______________YIRASSLPARPSSLVGPLTQNAGVLFCRKGGRC

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain