SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene89711

Length: 804 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene89711 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI	-	-	79%
FL-Next	sp=Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9; Arabidopsis thaliana (Mouse-ear cress).	-	-	66%
Blast2go	trehalose-6-phosphate	-	-	83%

Source	InterPros	Term	Type	Identity
Blast2go	Glycosyl transferase, family 20	IPR001830	-	83%
Blast2go	Trehalose-phosphatase	IPR003337	-	83%
Blast2go	HAD-like domain	IPR023214	-	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LRA7

Fln msg: Distance to subject end: 160 aas, your sequence is shorter than subject: 267 - 867

Fln protein: DGMNLTPYEYVGCRQGSSKVDEALGLSSGTSKKSMLVVSEFIGCSPSLSGAIRVNPWNIEAVADAMNVSLKISEAEQQLRHEKHYKYVSTHGVNYWAHSFEQDLERVCRDHYKRRCWGIGFGLSFRVVALSPSFRKLSTEHIVSAYKRTYRRAILLDYDGTMMPQTSINKTPDPQMISVVNSLCNDPKNVVFIVSGRGRKSLSEWFSPCHKLGIAAEHGYFIRWTRDAEWETCLQGADFGWQQIAEPVMKLYTETTDGSTIETKESA

Protein Length: 268

Fln nts: GGGATGGAATGAATCTCACTCCTTATGAGTACGTTGGTTGCAGACAGGGTAGCTCCAAAGTAGATGAAGCCTTGGGATTAAGTTCAGGAACTTCAAAGAAGAGTATGTTAGTTGTGTCTGAGTTCATAGGGTGCTCTCCTTCTCTCAGTGGAGCCATCAGGGTCAATCCCTGGAACATAGAAGCTGTTGCTGATGCCATGAATGTATCCCTGAAAATTTCTGAGGCTGAGCAACAACTACGGCATGAAAAACATTACAAGTATGTGAGCACACATGGTGTAAATTATTGGGCTCACAGCTTTGAGCAGGATTTGGAGAGAGTATGCCGGGATCACTATAAGAGAAGGTGCTGGGGTATTGGATTTGGATTGAGTTTCAGGGTTGTAGCACTGAGTCCAAGCTTTAGGAAGCTTTCTACAGAACATATTGTCTCTGCATACAAGAGAACCTACAGAAGGGCAATTTTGTTGGATTATGATGGTACTATGATGCCTCAGACTTCTATCAACAAAACACCAGATCCACAAATGATATCTGTTGTAAACAGCTTATGCAATGACCCTAAAAACGTTGTCTTTATTGTGAGTGGAAGAGGTCGGAAATCTCTCAGTGAATGGTTTTCACCTTGCCATAAGTTAGGGATTGCAGCAGAGCATGGCTATTTCATAAGGTGGACTCGAGATGCAGAATGGGAAACTTGTTTGCAGGGTGCAGACTTTGGCTGGCAACAAATTGCGGAGCCTGTAATGAAATTGTATACAGAGACTACTGATGGCTCTACGATAGAAACGAAAGAGAGCGCTT

Fln Alignment:

sp_v1.1_unigene89711___DGMNLTPYEYVGCRQGSSKVDEALGLSSGTSKKSMLVVSEFIGCSPSLSGAIRVNPWNIEAVADAMNVSLKISEAEQQLRHEKHYKYVSTHGVNYWAHSFEQDLERVCRDHYKRRCWGIGFGLSFRVVALSPSFRKLSTEHIVSAYKRTYRRAILLDYDGTMMPQTSINKTPDPQMISVVNSLCNDPKNVVFIVSGRGRKSLSEWFSPCHKLGIAAEHGYFIRWTRDAEWETCLQGADFGWQQIAEPVMKLYTETTDGSTIETKESA
Q9LRA7_______________DGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain