SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene89696

Length: 365 nt

UniGene Fasta

>sp_v1.1_unigene89696
CATTGTTCAGCTGTTCGCAAAGCACGGAGCGAAAGTCATAATCGCAGACGTTGCAGAGAAAGCTGGCAGAAAGCTTGCTGAATCCCTTTCTCCAGCTGCGACAACTTATGTGCACTGTGATGTCAGCAAAGAAGAAGACGTGAGCGCGGCTGTGGATCTGGCTATGGATAAGTATGGTCAACTGGACATTATGTACAACAACGCTGGAACTAACGACAGCTTTTTGGTGAAAAGCGTAGCAGAGTATGATATGGAGCAATTCGATCGAGTGATGAACGTAAACGTGAAAGGAGTGATGCACGGCATTAAGCACGCCGCCCGCGTGATGATCCCGCGGAAGAAGGGCTGCATAATCTCTACTGCCA

Ace file of the UniGene sp_v1.1_unigene89696

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Short chain alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9T6C0_RICCO	-	-	1.0e-32	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	short chain alcohol	-	-	0.0	83%

Source	InterPros	Term	Type	Identity
Blast2go	Short-chain dehydrogenase/reductase SDR	IPR002198	-	83%
Blast2go	Glucose/ribitol dehydrogenase	IPR002347	-	83%
Blast2go	NAD(P)-binding domain	IPR016040	-	83%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NMZ3

Fln msg: Distance to subject end: 127 aas, your sequence is shorter than subject: 121 - 289

Fln protein: IVQLFAKHGAKVIIADVAEKAGRKLAESLSPAATTYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCIISTA

Protein Length: 122

Fln nts: CATTGTTCAGCTGTTCGCAAAGCACGGAGCGAAAGTCATAATCGCAGACGTTGCAGAGAAAGCTGGCAGAAAGCTTGCTGAATCCCTTTCTCCAGCTGCGACAACTTATGTGCACTGTGATGTCAGCAAAGAAGAAGACGTGAGCGCGGCTGTGGATCTGGCTATGGATAAGTATGGTCAACTGGACATTATGTACAACAACGCTGGAACTAACGACAGCTTTTTGGTGAAAAGCGTAGCAGAGTATGATATGGAGCAATTCGATCGAGTGATGAACGTAAACGTGAAAGGAGTGATGCACGGCATTAAGCACGCCGCCCGCGTGATGATCCCGCGGAAGAAGGGCTGCATAATCTCTACTGCCA

Fln Alignment:

sp_v1.1_unigene89696___IVQLFAKHGAKVIIADVAEKAGRKLAESLSPAATTYVHCDVSKEEDVSAAVDLAMDKYGQLDIMYNNAGTNDSFLVKSVAEYDMEQFDRVMNVNVKGVMHGIKHAARVMIPRKKGCIIST
A9NMZ3_______________IVRLFTKHGAKVIIADIADEAGRTLAESLSPPAT-YLHCDVSKEQDISAAVDLAMEKHGQLDIMYNNAGINDSVMVKGVAEYDMEQFDRVMSVNVRGVMLGIKHAARVMIPRKKGCIIST

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain