SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene88254

Length: 465 nt

UniGene Fasta

>sp_v1.1_unigene88254
CGTGACCTTGGCTGTCACTCAATGTTGACGGAGAAGAGTGACGTGTATAGTTTTGGAGTAGTTTTGTTAGAGATCATATGCGGGCGAGCACCCATAGATATAAAACTGGCTGAAGAAAAAGTAAACATTGTTCGATGGGTGACACCATATCTGGTAGAGATGGGTGAAAATGGTGAAGAAATAATAGAAATCATAGACAAGAGGTTGGGTGGAAGTTACGACATGAAATCCATGACTCGTGTTGCCAAAGTAGCCTTGAGATGTGTTCAAACTGTGCCGTCTTGTAGGCCGAGTGTGGTTGAGATAGTCGCAGAGCTCAAAGAGGCTCTTAGAGATGAGGATAAGGATTCTATTTCCATTACAGAGGATGTTGGCATCCACAATGGGGATTTGGTGGCAGGTAGCGCGATTTCGAATAAACGCGAAGGCATGGAGTGGAGTGATAACAGCTCCAACATTCCAAAA

Ace file of the UniGene sp_v1.1_unigene88254

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO	-	-	2.0e-18	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Blast2go	symbiosis receptor-like kinase	-	-	3.09868e-18	64%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	3.09868e-18	64%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	3.09868e-18	64%
Blast2go	Protein kinase-like domain	IPR011009	-	3.09868e-18	64%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKY1

Fln msg: Distance to subject end: 18 aas, your sequence is shorter than subject: 155 - 431

Fln protein: RDLGCHSMLTEKSDVYSFGVVLLEIICGRAPIDIKLAEEKVNIVRWVTPYLVEMGENGEEIIEIIDKRLGGSYDMKSMTRVAKVALRCVQTVPSCRPSVVEIVAELKEALRDEDKDSISITEDVGIHNGDLVAGSAISNKREGMEWSDNSSNIPK

Protein Length: 156

Fln nts: CGTGACCTTGGCTGTCACTCAATGTTGACGGAGAAGAGTGACGTGTATAGTTTTGGAGTAGTTTTGTTAGAGATCATATGCGGGCGAGCACCCATAGATATAAAACTGGCTGAAGAAAAAGTAAACATTGTTCGATGGGTGACACCATATCTGGTAGAGATGGGTGAAAATGGTGAAGAAATAATAGAAATCATAGACAAGAGGTTGGGTGGAAGTTACGACATGAAATCCATGACTCGTGTTGCCAAAGTAGCCTTGAGATGTGTTCAAACTGTGCCGTCTTGTAGGCCGAGTGTGGTTGAGATAGTCGCAGAGCTCAAAGAGGCTCTTAGAGATGAGGATAAGGATTCTATTTCCATTACAGAGGATGTTGGCATCCACAATGGGGATTTGGTGGCAGGTAGCGCGATTTCGAATAAACGCGAAGGCATGGAGTGGAGTGATAACAGCTCCAACATTCCAAAA

Fln Alignment:

sp_v1.1_unigene88254___LTEKSDVYSFGVVLLEIICGRAPIDIKLAEEKVNIVRWVTPYLVEMXXXXXXXXXXXDKRLGGSYDMKSMTRVAKVALRCVQTVPSCRPSVVEIVAELKEALRDEDKDSIS
B8LKY1_______________LTSKSDVYSFGVVLLEMLTGRRSIDKHRSNGEQNLVEWARPYLVD----KRKLYRLVDPRLSGHYSIKGAQKVAQLAHYCLSRDPKARPTMNDVVEVLTPLLSLKDTASSS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain