SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene88069

Length: 1192 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene88069

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	spore coat protein, putative (EC:1.3.3.5)	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	65%
Blast2go	spore coat protein	-	-	71%

Source	GOs	Term	Type	Identity
Blast2go	cellular response to phosphate starvation	GO:0016036	Biological Process	71%
Blast2go	meristem maintenance	GO:0010073	Biological Process	71%
Blast2go	membrane	GO:0016020	Cellular Component	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cupredoxin	IPR008972	-	0.0	71%
Blast2go	Multicopper oxidase, type 2	IPR011706	-	0.0	71%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LRY9

Fln msg: your sequence is shorter than subject: 284 - 583

Fln protein: RDLGCHSRFYRFALSNGLHMTQIGSDSSYLPRPVNVKKLLLAPSEIADVIIDFAKSSTDEAILTNSAPYPYPSGSAVDNLNSKVMKFVIEKTKEPDTPIATRLVSYPLPNKNEIAQTRYITLYEYDSATGDPTHLFLNALPFLAPATETPRQGTNELWHIINLTPDNHPLHIHLGLFKTLSQIKLVNLTELQSCMNKTNNAVACNIEKHAQGRVIATPANERTWKNVFKMRPGYMTTIFLTLTLLESNQPYPFNASAEPGYVYHCHILDHEDNEMMRPLKILP*

Protein Length: 285

Fln nts: CGTGACCTTGGCTGTCACTCAAGATTCTACAGGTTCGCGCTGAGTAACGGACTTCATATGACTCAGATAGGGTCCGACTCTTCCTACTTACCCAGGCCCGTGAACGTTAAGAAATTGCTGCTGGCCCCCTCTGAGATCGCAGACGTCATCATCGACTTCGCGAAGTCATCCACGGATGAGGCCATCCTCACAAACAGTGCTCCCTATCCATACCCCTCCGGAAGTGCCGTCGATAATCTCAACAGCAAAGTCATGAAGTTTGTGATTGAGAAAACTAAGGAACCCGACACCCCGATCGCAACGAGATTGGTTTCATATCCTCTTCCCAACAAGAACGAGATCGCCCAAACGCGTTACATCACATTGTATGAATACGACAGCGCCACGGGTGATCCCACCCATTTGTTCCTCAATGCTTTACCATTTCTGGCACCGGCTACTGAGACGCCCAGGCAAGGAACCAACGAGTTATGGCATATCATCAATCTCACTCCGGACAACCATCCTCTCCATATTCATCTCGGCTTGTTTAAGACCCTCAGTCAGATAAAGCTGGTAAATTTGACCGAATTACAGAGCTGCATGAACAAGACGAACAATGCCGTGGCATGCAATATAGAGAAGCATGCTCAGGGTAGAGTCATCGCAACTCCTGCTAATGAGAGAACATGGAAGAACGTGTTCAAGATGCGGCCTGGATATATGACCACCATTTTCCTTACCTTAACTCTGCTGGAGTCTAATCAACCTTATCCCTTTAATGCCAGTGCTGAACCAGGTTACGTATATCACTGCCATATTTTGGACCACGAAGACAACGAGATGATGAGGCCCCTGAAAATTTTACCCTGA___TAATGGTGTCCATTGCTCTACACATTGGCCACAGTTGATTATGTTGTATTTAATTTCTGTATAGCCTGCCCCTGTTCCTTAGGGTAGCCATTTCTTCAATAAATTGCAGGCACATGTCAAACTCTTTCTATTTCCACTCCGACAACTTCACATTTCGGAGAAACTTTGATTTTTTATTGCGCGATAATTGCAATAATAGTCTGCGTTAGTTTTCGCATTTTCTTTGCTATTGTCCAGCTCCGTTGTTTAATTCAACGGTCCTGAATGTTACAATTTGACTTAAAAACAGTCAAACTAGCTGTATATTTGAAGTTTCTTATTATATCTAGTTAAACTTTTT

Fln Alignment:

sp_v1.1_unigene88069___HSRFYRFALSNGLHMTQIGSDSSYLPRPVNVKKLLLAPSEIADVIIDFAKSSTDEAILTNSAPYPYPSGSAVDNLNSKVMKFVIEKTK-----EPDTPIATRLVSYPLPNKNEIAQTRYITLYEYDSATGDPTHXXXXXXXXXXXXTETPRQGTNELWHIINLTPDNHPLHIHLGLFKTLSQIKLVNLTELQSCMNKTNNAVACNIEKHAQGRVIATPANERTWKNVFKMRPGYMTTIFLTLTLLESNQPYPFNASAEPGYVYHCHILDHEDNEMMRPLKI
B8LRY9_______________NARFYRFALSNGLNMTHIGSDSTYIPMPVTAKQFLLGPSELADIVIDFTDSPTGEAILTNDAVYPYPSGDPVDHLNSKVMKFVIESKRGALSSHDESRIPEKLIEYRRPLKESAAHTRYITMYEYESASEEPTHLFFNGLPYDAPATETPRQGTSELWHVIDLTDDNHPLHIHLGLFVVLQQTELLKLDEFKACMQKQNDALRCNVEKHAKGKVMAAPVQERGWKNVFKIQPGYITTILVQFSFLDSHQPYPFNASTEPGYVYHCHILDHEDNEMMRPLKI

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain