SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene86420

Length: 504 nt

UniGene Fasta

>sp_v1.1_unigene86420
GTGACCTTGGCTGTCACTCAAGTGCAGGAAATGCTTGATCTTGCAATCAAGTATAATAAAGCTGTACAAGAAGAGGATCAGCTCTCTCCTGAAAAGCTGGCTATTGCAAATGTTGGCAGACAAGATGCGAAAAAGCACCTAGAAGAGCATGTCTCTAATCTGATGTCTTCAAACATAGTTCAAACACTTGGGACAATGCTCGATACAGTGGTGTTTTAGTTCTTTTGTCTTAATTGGTTTTACCAAGCCAGTGCACGTGAATCATGAGAAACAACAGAAAATGGGAAACAATGGTGGTATCGTACCACTCTAAAAGTTTACTTTTGTTGAACTCTTGGATGTTAAGACTTAATGCAAAAGGAATTCAATCATTTGGATGCTGATTTATTATGCAGTGTATATTCCATTGAATGGAATTTGACGGGCAAATTTCAAATTTTGCTACAGCATTGGTTGGTTGATTTATTAGATATCTTGAACGTGTGCCGTAAGCAGGTGAATTTT

Ace file of the UniGene sp_v1.1_unigene86420

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	26S proteasome non-ATPase regulatory subunit 14; K03030 26S proteasome regulatory subunit N11	-	-	9.0e-27	95%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	98%
Blast2go	26s proteasome non-atpase regulatory subunit 14	-	-	1.2602e-27	97%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to salt stress	GO:0009651	Biological Process	1.2602e-27	97%
Blast2go	intracellular part	GO:0044424	Cellular Component	1.2602e-27	97%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQK2

Fln msg: your sequence is shorter than subject: 73 - 308

Fln protein: VTLAVTQVQEMLDLAIKYNKAVQEEDQLSPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF*

Protein Length: 74

Fln nts: GTGACCTTGGCTGTCACTCAAGTGCAGGAAATGCTTGATCTTGCAATCAAGTATAATAAAGCTGTACAAGAAGAGGATCAGCTCTCTCCTGAAAAGCTGGCTATTGCAAATGTTGGCAGACAAGATGCGAAAAAGCACCTAGAAGAGCATGTCTCTAATCTGATGTCTTCAAACATAGTTCAAACACTTGGGACAATGCTCGATACAGTGGTGTTTTAG___TTCTTTTGTCTTAATTGGTTTTACCAAGCCAGTGCACGTGAATCATGAGAAACAACAGAAAATGGGAAACAATGGTGGTATCGTACCACTCTAAAAGTTTACTTTTGTTGAACTCTTGGATGTTAAGACTTAATGCAAAAGGAATTCAATCATTTGGATGCTGATTTATTATGCAGTGTATATTCCATTGAATGGAATTTGACGGGCAAATTTCAAATTTTGCTACAGCATTGGTTGGTTGATTTATTAGATATCTTGAACGTGTGCCGTAAGCAGGTGAATTTT

Fln Alignment:

sp_v1.1_unigene86420___VQEMLDLAIKYNKAVQEEDQLSPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF
C0PQK2_______________VQEMLDLAIKYNKAVQEEDQLTPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain