SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84929

Length: 1328 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84929

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF584 domain containing protein	-	-	2.0e-34	33%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	52%
Blast2go	uncharacterized protein	-	-	4.68347e-20	59%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NX27

Fln msg: Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 115 - 241

Fln protein: MIPTGVSVKPRSSEEYSGSARKYHRSAPVNVPPWSKSNQTSMKSQLMVNPGLEEVEDDDENDEERLPPHEITAREYAMSQMTTFSMCEGLGRTLKGRDQSRVRNAVWRQTGFLD*

Protein Length: 116

Fln nts: TTGTAAAGGTGCCGAGGGTTTTAAAGAGGGGGTTTGTGAAGATTCTGCGTGGCTTTGCGTGATTCTTCGTCGGTTTTGAGTGGTTATCAGTCTGGAGTGATGACGAGGGCCTTCTGTTCCCTAGAAACTCTCCGGAATTTAAGGGTTTCTTGACCGAGAAAGGGGACTTCTTTACTGCACTTTCAAGCTATTAAAGAAGGCGGCCATGAGATGTACAGATCTTTGAAGGTATATTGGTTTTTCTAGGAAGATACCAGAGTAAATTAGAATTACTATGGAAGGGGGAAACAATCGACCGCCGAGGATTTCGTCAGGATTGAGCGCGGCTAAGCTGTTATTAGGCAACAGCGCAACGGAGCCTGTTTTGTCGAACGGTGTGGAATGGGACGAATCGGACGTGGTCTGGTCCGGAGATTATGAAGAAACGCCCAAGGAACCGCAGATAAGAAGTGGGCTTTCAGGGATCGGTCTGAGTAATGGCTTCAGCAGTATTGGCGGAAGTCGTAACGGAAGCAACATCAATGCTGCCAGGAGGCGGGTGGAATCGAGCAAGGGGTCTCGGGGTTGTCCGTTGCGCTGACTGATGACAGGCGCTCGTTGGGCCGGTCGAGCCTAAGCAGAAGCCCTGCCAGCGTGGCCACGGCGAGG_-_ATGATTCCGACTGGGGTCTCTGTTAAGCCGAGGAGTTCAGAAGAGTATTCCGGCTCTGCCCGGAAGTATCACCGTTCCGCGCCGGTGAACGTACCTCCGTGGTCTAAAAGTAACCAGACTTCGATGAAATCCCAGCTTATGGTGAACCCTGGTTTGGAAGAAGTTGAGGACGATGATGAGAATGATGAAGAGAGGCTGCCCCCGCATGAGATTACAGCACGTGAATATGCAATGTCCCAGATGACCACGTTTTCGATGTGCGAGGGCTTGGGGCGGACGCTCAAAGGACGGGATCAAAGCCGGGTGCGCAACGCTGTCTGGCGACAAACCGGGTTTTTGGACTGAACTGATTGCTGTCTTTTTTGAGAACCCCCTCTGTTTAAAACTTTTCTTTCAAGTTTGAATATTTACTATGAAGCCGTTTTAATTTTCGCTGCACATAAGGAATTCGAGGGCATACGATAACGAGCTAGAGGGCTTTTGGCCATTTGGAATTGAACTTATGCTCATTAGTCATCTGTGGGGTCATGTTTATACGTTGGGGGGATTTTATTGGATGTATTTTTTGTGGGTTCTCTAAGACATTATTTTTTTTGTTGGGTTAAGAGCAGTGTTGGAGAGGGCCAATGAAAAATGCTTGTCGGGATCTTGTTTTGGCACATACAGATTGTGCTGATCAA

Fln Alignment:

sp_v1.1_unigene84929___PASVATARMIPTGVSVKPRSSEEYSGSARKYHRSAPVNVPPWSKSNQTSMKSQLMVNPGLXXXXXXXXXXXX--RLPPHEITAREYAMSQMTTFSMCEGLGRTLKGRDQSRVRNAVWRQTGFL
A9NX27_______________PANRISVRMIPSA-DQNGNTSGSSSNMMMMHHQSAPVNVPDWSKILGVGMDRLKENNPNLFFSAAADEDEDGGDMLPPHEYLAREQARSQMTTTSVFEGVGRTLKGRDMSRVRNAVWRQTGFL

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain