SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84866

Length: 1271 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene84866 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative (EC:2.7.10.2)	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	45%
Blast2go	protein	-	-	82%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	82%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	82%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	82%
Blast2go	Protein kinase-like domain	IPR011009	-	82%
Blast2go	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	82%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	82%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	82%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	82%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQ93

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 140 aas, your sequence is shorter than subject: 220 - 350

Fln protein: MTSTATDRSRALSVASRKSNVYGNTFNANSKPGTMTFTMSGLSKATGNFSPSNKIGQGGFGTVYKGKLKDGTLVAIKRAKKNIYDKHLSVEFQSEIRTLSSVEHLNLVRFLGYLEDEQERILVVEYVPNGTLREHLDCVHGIVLDLATRLDIAIDVAHAVTYLHMYTDRPIIHRDIKSSNILLTENFRAKVADFGFSRLAPEDIGATHISTQVKGTAGY*

Protein Length: 221

Fln nts: GACAAGAGGGCGCCATCTGCAAATTTATTGCCTGTCTAATGTGACTACAACTTCTAAGTTTGTTGCTTGCTTGTTTAGTTCTAGTAAAATTTTGAGGAAACATTGCAGGTAGTAATGGGATGAAGTTGCAGGTATTATCTTTATCTTCAAAGGTCACTTGCCGAATCATTGAAGGGTTTTAAATATTTTCCTTTCAATGGAGAGGCAACCACAGAATTTTGATGACCTGACATAACGGCACATATGTAGAATTCTGAAAATTGCGGCTTTTCAGGAAAATGCAAACCTTAAGGAAAACGTTGCTCTCTCGCAAATGGTGCGTTATGTTCCAAGTGGCGTGGGAGGCCTTGCTTCAGAAAGTTTGATCCCTCGCCTGAAAATGCCAGAGGGCTAAAATTTGCTATGAAAAACTAAGATCTCGGACCTTAGTTTTGTAGGGAGCTCAGATTGCCATGCTGGCCCCAATTTTCTCTCTGATTTTGTCAATCGTCTTGTTATTTGATTTGGATTGTCACCCAGTAGATTTGGAATATCACCATGCAGATGGTCCCCTGCTTTTAGAGCTTTTGATCTTTACAGTCCACAGGCTCTTCATGTTGCATGATCA_-_ATGACTTCAACAGCCACAGATCGAAGCAGAGCCCTGAGTGTGGCCTCACGCAAGAGTAACGTCTATGGTAATACCTTTAACGCAAATAGTAAACCTGGAACAATGACCTTTACCATGTCCGGGCTCAGCAAAGCCACAGGAAACTTCAGTCCTTCTAACAAGATTGGACAAGGAGGTTTTGGGACAGTTTATAAAGGGAAACTCAAGGATGGAACCCTGGTTGCAATTAAGCGTGCAAAAAAGAATATCTATGACAAACATCTTTCTGTGGAATTCCAAAGTGAGATCCGAACATTGTCAAGTGTGGAACACCTCAATCTGGTCAGATTCCTTGGCTACTTGGAAGATGAACAGGAACGGATACTTGTTGTCGAGTATGTGCCAAATGGAACTCTTCGGGAGCATTTGGACTGTGTACACGGGATTGTATTGGACTTAGCTACAAGACTGGATATTGCCATTGATGTTGCCCATGCAGTGACTTATCTTCACATGTATACAGATCGGCCAATCATCCACAGAGATATTAAATCCTCCAACATTTTACTCACTGAAAATTTCAGGGCCAAAGTAGCGGACTTTGGTTTTTCCAGGCTTGCTCCAGAAGATATTGGCGCAACTCATATTTCTACACAAGTCAAAGGAACAGCAGGTTATTAGATCC

Fln Alignment:

sp_v1.1_unigene84866___FTMSGLSKATGNFSPSNKIGQGGFGTVYKGKLKDGTLVAIKRAKKNIYDKHLSVEFQSEIRTLSSVEHLNLVRFLGYLEDEQERILVVEYVPNGTLREHLDCVHGI--VLDLATRLDIAIDVAHAVTYLHMYTDRPIIHRDIKSSNILLTENFRAKVADFGFSRLAPEDIGATHISTQVKGTAGY
B8LQ93_______________FSLKELHSATNNFNYDNKLGEGAFGSVYWGQLWDGSQIAVKRLK--VWSTKAEMEFAVEVEILGRVRHKNLLSLRGYCSEGQERLIVYDYMPNLSILSHLHGQHAAECLLDWSRRMNIAIGSAEGLAYLHHHATPHIIHRDIKASNVLLDSDFKAQVADFGFAKLIPE--GETHVTTGVKGTVGY

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain