SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84850

Length: 283 nt

UniGene Fasta

>sp_v1.1_unigene84850
TGTTTGATTTTCCTTTCGACACTTTAAATTCTGCGGATTTGACCGATTTGTCACTCTACGGTAAGAAAAAGCTCTAAAGAATGGCCTTGACTCCTTTCTTTGGTCGGTCGAGGGCTGGAAGCCTGTGGGATCCATGGGACCGCAGCCTGTTTGATCCGAGTGTACCTGTTTCTCGAATCTGGGACGTCTTCGACTACGGCAGCGCTTTGGACTCCCCGGCCTTTTCCTTCTCTCGGAGTCGGGACGCGCAGGCTATTGCCAACACGAAGCTCGACTGGAAGGA

Ace file of the UniGene sp_v1.1_unigene84850

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	1.0e-26	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	unknown [Picea sitchensis]	-	-	2.30726e-26	88%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P1C1

Fln msg: Distance to subject end: 107 aas, your sequence is shorter than subject: 67 - 176

Fln protein: MALTPFFGRSRAGSLWDPWDRSLFDPSVPVSRIWDVFDYGSALDSPAFSFSRSRDAQAIANTKLDWK

Protein Length: 68

Fln nts: TGTTTGATTTTCCTTTCGACACTTTAAATTCTGCGGATTTGACCGATTTGTCACTCTACGGTAAGAAAAAGCTCTAAAGA_-_ATGGCCTTGACTCCTTTCTTTGGTCGGTCGAGGGCTGGAAGCCTGTGGGATCCATGGGACCGCAGCCTGTTTGATCCGAGTGTACCTGTTTCTCGAATCTGGGACGTCTTCGACTACGGCAGCGCTTTGGACTCCCCGGCCTTTTCCTTCTCTCGGAGTCGGGACGCGCAGGCTATTGCCAACACGAAGCTCGACTGGAAGGA

Fln Alignment:

sp_v1.1_unigene84850___MALTPFFGRSRAGSLWDPWDRS---LFDPSVPVSRIWDVFDYGSALDSPAFSFSRSRDAQAIANTKLDWK
A9P1C1_______________MALTPFFGRSRAGSLWDPWDRSSNSLFDPWIPVSRIWDVFDVGSALDSPTFSF--SRDAQAVANTKLDWK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain