SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84807

Length: 1063 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84807

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glutenin_hmw multi-domain protein	-	-	2.0e-05	25%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	ppmp i antigen cs34	-	-	0.0	52%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVN0

Fln msg: warning!, putative chimeric sequence! or repetitive structure query STOP codon too far from subject stop. Distance to subject end: 106 aas, putative chimeric sequence, your sequence is shorter than subject: 227 - 525

Fln protein: VQGNSVQGDQRDFRPTESRDNMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxPMSGYRQDYRPPVDARGSTPGYQQDYRPPMDARGPTPGYQQDYRPPVDARAPMPGYQQDYRPPVDTRGPLPGNQQSYRPPSDGRGPMSGVPQDYRSPVDARGPMPVSGDRQDYRPPVDSRGPMPGGQPDYRPSMEGRGWMPGQQQDYIPPVEGGGSVSGESRDYMPSREPTQGQQ*

Protein Length: 228

Fln nts: GGTACAGGGAAATAGTGTGCAGGGTGACCAACGGGATTTTAGGCCAACAGAAAGTAGGGACAACATGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCAATGTCGGGATATCGACAAGACTACAGGCCACCTGTGGATGCAAGGGGTTCGACGCCAGGATATCAACAAGACTACAGGCCACCTATGGATGCAAGGGGTCCAACGCCGGGATATCAACAAGACTACAGGCCACCTGTAGATGCAAGGGCTCCAATGCCGGGATATCAACAAGATTACAGGCCACCTGTGGATACAAGGGGCCCATTGCCTGGAAATCAGCAATCCTACAGGCCACCTTCGGATGGAAGAGGTCCGATGTCAGGAGTCCCACAAGATTATAGGTCTCCTGTAGATGCACGAGGCCCAATGCCGGTATCCGGAGACCGACAAGACTACAGGCCACCAGTGGATTCAAGAGGCCCGATGCCGGGAGGCCAGCCAGACTACAGGCCATCTATGGAAGGAAGAGGTTGGATGCCAGGTCAGCAACAAGACTACATACCGCCAGTGGAAGGAGGAGGCTCAGTATCAGGAGAGAGCAGAGATTACATGCCTTCTAGAGAACCAACACAGGGTCAACAGTGAGATTCAATGGGAGTACAAGGCCAATATTTAGTGCATGTGGTGTAAAGGAGGCCTTTTCGATGACCAATGGAACAAACTACTTCAACATGTCTAGTTTCAAGAGGAAGTTAAGCTGCTTGCAAAATTGAACTGGAAATGTATAAACGATAGTCTTATCCCTTTTGTGGAAAGATCTGATTGTTTTAGTTATAGGCAGGTTAATGAAGATTACCATGCATGACTGGGTGAACAGAAGAGAAATGCGACTATTGGGGTTTGTTCTCCATGTTTGATTCCATACTGCCTTTTTTTGCTCATTGAATAGGATTAGTGGTTTGCAAGGTGTAGGTGGGTGGCCTTTCAGTTTAGTTGTTACTAGACTACAAATTTATGTTATTCTTCA

Fln Alignment:

sp_v1.1_unigene84807___VQGNSVQGDQRDFRPTESRDNMQGGQGVYRPMDGRAPMAGDRPDHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxPPMDARGPTPGYQQDYRPPVDARAPMPGYQQDYRPPVDTRGPLPGNQQSYRPPSDGRGPMSGVPQDYRSPVDARGPMPVSGDRQDYRPPVDSRGPMPGGQPDYRPSMEGRGWMPGQQQDYIPPXXXXXXXXXXXRDYMPSREPTQGQQ*DSMGVQGQ
A9NVN0_______________IQGNSVPGDQRDFRPTESRDSMQGGQRVYRPMDGRATVAGDRQDYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxP-------LPGDRQDYRPPVDARGPVPGYRQDYRPPVDARGPMPGYQQDYRPPVDARGPFPGNQQDYRPPVDARGQFP--GNQQDYRPPVDARGPMPEYRQDYRPPLDGRDSMSANQQDYRPPVDARGPMPEYRQDYRP---PLDGR--DSMSAVRQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain