SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84733

Length: 1118 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene84733 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Anthocyanidin synthase n=1 Tax=Ginkgo biloba RepID=B2M0X8_GINBI	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	anthocyanidin synthase	-	-	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	78%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVW2

Fln msg: atg_distance in limit (1-15): atg_distance = 6, W2: There is no M at the beginning, your sequence is shorter than subject: 338 - 359

Fln protein: VESLALSGLAAIPAEYVRPVEERPTECVLNLKGGNEAEGPQIPVVDVAGWDSADEEIKKEIGRQVAEASRSWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNVSGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGRQIRKLVTKILATLSLDLGVEEDRMERVLGGELALGVEAHTDISALTFLLHNMVPGLQLYKDGKWVTAKCIPGAILVHIGDQVEILSNGQFQSGLHRGLVNKEKVRISWAVFCDPPKNALIGPMKEVVDENNPPLFPAKTFQQHTDHKLFKKAQAQAEAEAAKKLNQST*

Protein Length: 339

Fln nts: GTGGAGAGCCTGGCATTGAGCGGCCTGGCCGCTATTCCTGCCGAGTACGTGAGACCAGTGGAGGAGAGGCCTACTGAGTGCGTTCTCAACTTGAAAGGAGGAAACGAAGCCGAAGGTCCGCAGATTCCGGTGGTAGACGTTGCCGGATGGGATTCTGCCGACGAGGAGATCAAGAAGGAGATCGGGCGTCAGGTGGCGGAGGCGAGCAGATCGTGGGGAGTGATGCAGCTGCTGAACCACGGCATATCTGAGATTCTGATAGAGCGGCTTCAGGCAGCCGGGAAGGCGTTCTTCGATCTCCCTGTTGAAGAGAAAGAGAAGTACGCGAATGACCACGCAGCGGGGAAGATAGCGGGGTACGGCTCCAAGCTCGCCAACAACGTCAGCGGTCAGCTTGAATGGGAAGATTACTATTTCCACCTGCTATGGCCTGAACAGCGCAGAGACATGACCACCTGGCCGAAGCACCCCCAAGAATACATCGAGGTGACAGACGCTTACGGTCGGCAGATACGGAAGCTTGTGACCAAAATCTTGGCCACGCTTTCGTTGGATCTGGGCGTGGAGGAAGACAGAATGGAGCGCGTGCTCGGCGGGGAGCTCGCTCTCGGAGTGGAGGCACACACCGACATAAGCGCGCTCACATTTCTTCTGCATAACATGGTGCCCGGCCTTCAGCTCTACAAAGATGGCAAATGGGTCACCGCCAAATGCATTCCCGGCGCCATCCTCGTCCACATTGGTGACCAAGTCGAGATTTTGAGCAACGGGCAATTCCAGAGCGGACTGCACAGAGGGCTGGTGAATAAAGAGAAGGTGAGGATTTCATGGGCGGTGTTCTGCGATCCCCCCAAAAATGCCCTAATCGGACCCATGAAGGAAGTGGTGGACGAGAACAACCCTCCATTGTTTCCGGCGAAAACCTTCCAACAGCACACCGATCACAAGCTGTTCAAGAAGGCCCAAGCCCAGGCGGAGGCCGAGGCAGCCAAGAAACTGAACCAGTCTACTTAA___ATGCTGGGCAGGGCTACGACCTGAGACGTTACTGTTAGATGATACTTTCTGCTGGTGGGCTGTTGAAGTGCGACTTACTTTTTCCAGCGGCTGATAGAATTATT

Fln Alignment:

sp_v1.1_unigene84733___VESLALSGLAAIPAEYVRPVEERPTECVLNLKGGNEAEGPQIPVVDVAGWDSADEEIKKEIGRQVAEASRSWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNVSGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGRQIRKLVTKILATLSLDLGVEEDRMERVLGG------------------ELALGVEAHTDISALTFLLHNMVPGLQLYKDGKWVTAKCIPGAILVHIGDQVEILSNGQFQSGLHRGLVNKEKVRISWAVFCDPPKNALIGPMKEVVDENNPPLFPAKTFQQHTDHKLFXXXXXXXXXXXXXKLNQST
A9NVW2_______________VESLALSGLAAIPPEYVRPVEERPTECVLKVKGV-EDEGPQIPVVDIAGWDSADEEIKKEIGRQVAKASREWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNASGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGREIRKLVTKILATLSSDLGVEEERLERVLGGENLEMQLKINYYPRCPQPELALGVEAHTDISALTFLLHNMVPGLQLFYEGKWVTAKCIPGALIVHIGDQVEILSNGKFTSGLHRGLVNKEKVRISWAVFCDPPKDALIGPMKEVVDESNPPLFPAKTFKEHTDHKLFKKAQAQAEAQAAKKLDQST

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain