SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84640

Length: 502 nt

UniGene Fasta

>sp_v1.1_unigene84640
ATGGGGAATTCATCGGCAATCCTCACTGAAAACCGTTGCCCACGTGAAAATAGACCGACCAACTAGTCTGATGTTTAATTTTTAACAAATTTCTCAACTTTTCCAAAAGCTAAGAGGAATCACACGCAGCCTCGCCACATTCAGATCTATTCTCAGGGAGATATTTTATTTGACAGCTATCCCCTCTGCTGTGCAACTTTCTGGGCTTCGTTTGTGTATATAATTACAACCCTAGTCATATTGAAGAGACCGCCTGCAGGATCCAGCACCCGGAGCACTCACGTTAGATTTCGGCGGTGTTTCAAGGCCAGAGCAGTGCAGGCCTCTGTGGGCGCAGAGTCAGCCATCTCAAACCACGGTCACATGGAATCAAGGAATCTTTATGAAGTTCTGGCAGTAAGCCCCTCAGCGACTGCAAAGGATATAAAGAGGGCTTACAGAAAACTGGCGCGGGAGTTTCATCCGGATCACGCGGCTTCTCCTGAGGATAAAAACGAGAGCA

Ace file of the UniGene sp_v1.1_unigene84640

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Co-chaperone-curved DNA binding protein A n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q3K6_NITSB	-	-	3.0e-06	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	87%
Blast2go	unknown [Picea sitchensis]	-	-	2.46343e-36	91%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Heat shock protein DnaJ, N-terminal	IPR001623	-	2.46343e-36	91%
Blast2go	Heat shock protein DnaJ	IPR003095	-	2.46343e-36	91%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PS62

Fln msg: Distance to subject end: 66 aas, W1: There is no M at the beginning, your sequence is shorter than subject: 141 - 177

Fln protein: FLTNFSTFPKAKRNHTQPRHIQIYSQGDILFDSYPLCCATFWASFVYIITTLVILKRPPAGSSTRSTHVRFRRCFKARAVQASVGAESAISNHGHMESRNLYEVLAVSPSATAKDIKRAYRKLAREFHPDHAASPEDKNES

Protein Length: 142

Fln nts: ATGGGGAATTCATCGGCAATCCTCACTGAAAACCGTTGCCCACGTGAAAATAGACCGACCAACTAGTCTGATGTTTAATTTTTAACAAATTTCTCAACTTTTCCAAAAGCTAAGAGGAATCACACGCAGCCTCGCCACATTCAGATCTATTCTCAGGGAGATATTTTATTTGACAGCTATCCCCTCTGCTGTGCAACTTTCTGGGCTTCGTTTGTGTATATAATTACAACCCTAGTCATATTGAAGAGACCGCCTGCAGGATCCAGCACCCGGAGCACTCACGTTAGATTTCGGCGGTGTTTCAAGGCCAGAGCAGTGCAGGCCTCTGTGGGCGCAGAGTCAGCCATCTCAAACCACGGTCACATGGAATCAAGGAATCTTTATGAAGTTCTGGCAGTAAGCCCCTCAGCGACTGCAAAGGATATAAAGAGGGCTTACAGAAAACTGGCGCGGGAGTTTCATCCGGATCACGCGGCTTCTCCTGAGGATAAAAACGAGAGCA

Fln Alignment:

sp_v1.1_unigene84640___KRPPAGSSTRSTHVRFRRCFKARAVQASVGAESAISNHGHMESRNLYEVLAVSPSATAKDIKRAYRKLAREFHPDHAASPEDKNES
C0PS62_______________QRPPAGSSTRSTNLRFRRCFKMRAVQASVGAEAAISDQRHMESRNLYEVLAISPAATAKDIKRAYRKLAREFHPDHAASPQDKNES

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain