SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84532

Length: 1086 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84532

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	leucine-rich repeat family protein / protein kinase family protein	-	-	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	81%
Blast2go	brassinosteroid insensitive 1-associated receptor kinase 1 expressed	-	-	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	90%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	90%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	90%
Blast2go	Protein kinase-like domain	IPR011009	-	90%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLV1

Fln msg: Overlapping hits, possible frame ERROR between 273 and 252, your sequence is shorter than subject: 253 - 607

Fln protein: LVYPYMENLSVAYRLRELKPGEKGLDWPTRKQVAFGAARGLEYLHEHCNPRIIHRDLKAANILLDEDYEAVVGDFGLAKLVDAxxxxxxxxxRGTMGHIAPEYLSTGRSSERTDVFGYGITLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDAIVDANLKQNYDAKEVEAMIQVALLCTQTSPEDRPKMTEVVRMLEGEGLDERWEEWQQVEVIRRQEYELMPRRFEWAEDSVYNQDAIELSGGR*

Protein Length: 254

Fln nts: CTTGTGTACCCTTACATGGAGAATCTCAGTGTTGCATATCGACTACGGGAACTCAAACCTGGGGAGAAAGGACTTGACTGGCCTACGCGAAAACAGGTGGCTTTTGGTGCAGCTCGTGGTTTGGAGTACCTTCATGAGCACTGTAATCCAAGGATCATTCACCGTGACCTGAAGGCTGCCAATATTTTGTTAGATGAAGATTACGAAGCAGTTGTTGGTGATTTTGGATTAGCGAAGTTGGTTGATGCTxxxxxxxxxxxxxxxxxxxxxxxxxxxCGTGGAACTATGGGTCATATTGCTCCTGAATACTTATCAACTGGAAGATCCTCAGAGAGGACAGATGTGTTTGGTTATGGTATTACTCTTTTGGAGCTTGTCACTGGACAACGTGCTATAGATTTTTCACGTCTCGAGGAAGAGGATGACGTTCTATTATTGGATCATGTTAAGAAGTTACAAAGAGAGAAAAGATTAGATGCTATTGTAGATGCAAACCTAAAGCAGAACTATGATGCAAAAGAAGTTGAAGCAATGATTCAGGTAGCATTGTTGTGCACACAGACCTCACCAGAAGATCGACCCAAAATGACAGAAGTTGTGCGCATGTTGGAAGGAGAGGGTTTGGATGAACGTTGGGAAGAGTGGCAGCAGGTTGAAGTCATTCGTCGACAAGAATATGAACTGATGCCTCGAAGGTTTGAGTGGGCTGAGGATTCTGTATATAACCAGGATGCAATCGAACTCTCTGGTGGAAGATGATCAACATGGGCTTTGGTGTCTCATATTTTTGTAACTTGGAACACTTTACAGTTTTCTTCAAGTATATCATTATTGGAACTGTAAAAGCGGTTTTTAAGGTCGTCAGATTTTATTTACCTATTCTTTCACTTTTGTATGCAAGGTGTGACTGCTTGTTCGACGGTACTCGAATGCATTTTAAATCCCTGCTTCATCAGTAGGAAATCTCCAATCATACTGTTGTCCATTTGCAATTGTGTACATTAGATATTTACCTAGGTATCCTTGAACATCTGAATACCAGGAAAACCCTGACTTTCATTAACCAGGAAAGATCTGGATTATGATG

Fln Alignment:

sp_v1.1_unigene84532___LVYPYMENLSVAYRLRELKPGEKGLDWPTRKQVAFGAARGLEYLHEHCNPRIIHRDLKAANILLDEDYEAVVGDFGLAKLVDAKxxxxxxxxxGTMGHIAPEYLSTGRSSERTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXXXXXXQREKRLDAIVDANLKQNYDAKEVEAMIQVALLCTQTSPEDRPKMTEVVRMLEGEGLDERWEEWQQVEVIRRQEYELMPRRFEWAEDSVYNQDAIELSGGR
B8LLV1_______________LVYPYMQNLSVAYRLRELKPTEKPLDWPARKNVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDARxxxxxxxxxGTMGHIAPEYLSTGRSSERTDVFGYGITLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDAIVDGNLKQNYDAKEVEAMIQVALLCTQTSPEDRPKMTEVVRMLEGEGLDERWEEWQQVEVIRRQEYEMIPRRFEWAEDSIYNQDAIELSGGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain