SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84441

Length: 864 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84441

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	unknown [Picea sitchensis]	-	-	67%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: D5A984

Fln msg: atg_distance in limit (1-15): atg_distance = 13, W2: There is no M at the beginning,

Fln protein: SLKTQTSIPRCFRDSILKSAAASGSRFPDKNGASKSGLEYFCGLALKERKKNNGGSGGSHMSEGRKSGGFTVRAAKRVGSDRSFLMSTTLVAKEEEEEKVVELCRSITEWGQQKQKDRTSGVLQFGCFADLYSKHTYHFMERYSSFEHIVSFRSLPEHTEFINDVRPLLTQPIGLAVYEYENGQIGHMRTPMGPKGEGGLDDATGQAGIGGGVSHKQQSKTIQDTKVPEKKDKGAWSLQKALQKMRAAKAEESDDAVKSKNDKSEN*

Protein Length: 268

Fln nts: CTTCTCTCAAAACCCAGACATCTATTCCTCGCTGCTTCCGCGACTCGATCCTTAAATCTGCGGCAGCTTCGGGAAGTCGTTTTCCAGATAAAAATGGCGCGAGCAAGAGTGGCCTCGAGTACTTTTGTGGGTTGGCATTGAAGGAGAGGAAGAAGAACAATGGGGGTTCAGGGGGCAGTCACATGAGCGAGGGGCGCAAGAGTGGAGGGTTTACCGTACGAGCCGCTAAGAGAGTGGGCTCCGATCGTAGCTTCCTGATGAGCACTACATTGGTGGCCAAAGAAGAAGAGGAAGAGAAAGTGGTGGAGTTGTGCCGATCAATTACAGAATGGGGACAACAGAAGCAGAAAGATCGAACTTCTGGTGTTCTACAATTTGGATGTTTTGCTGATCTGTATAGCAAGCATACTTATCATTTTATGGAGCGCTATAGCAGCTTTGAGCATATCGTGAGCTTCAGGTCATTGCCAGAGCATACGGAGTTCATTAATGATGTGAGGCCTCTATTGACCCAGCCAATAGGACTTGCAGTTTATGAGTATGAGAATGGTCAAATTGGTCATATGAGGACTCCAATGGGGCCTAAGGGTGAAGGTGGATTGGATGATGCAACTGGTCAAGCTGGAATAGGAGGCGGCGTTAGCCACAAACAGCAGTCTAAAACTATCCAGGATACAAAAGTCCCTGAGAAAAAAGACAAAGGTGCTTGGAGTTTACAAAAGGCTCTTCAGAAGATGAGAGCTGCGAAAGCAGAGGAATCCGATGATGCTGTTAAAAGTAAAAATGATAAATCCGAAAATTAA___AACATGTTAACCATAGTTAGAATTAGAAATGAAAATATGAATTTTACCATATATATATATT

Fln Alignment:

sp_v1.1_unigene84441___SLKTQTSIPRCFRDSILKSAAASGSRFPDKNGASKSGLEYFCGLALKERKKNNGGSGGSHMSEGRKSGGFTVRAAKRVGSDRSFLMSTTLVAXXXXXXXXXXLCRSITEWGQQKQKDRTSGVLQFGCFADLYSKHTYHFMERYSSFEHIVSFRSLPE--HTEFIND---VRPLLTQPIGLAVYEYENGQIGHMRTPMGPKGEGGLDDATGQAGIGGGVSHKQQSKTIQDTKVPEKKDKGAWSLQKALQKMRAAKAEESDDAVKSK
D5A984_______________SLKTQTSIPCCCRDSILIPAAASGIRFAYKNGTGKSGLEYFTRLALKKKKKN-GGPGGGHMSEGRKSGGFSIRAAKRVVSARSFLMSTTLVAKEEEEEKVVELCRSITEWGQQKQKDRSFGVLQFGCFADLYGKHTYHFMERYSSFEHIVNFRILNQVTTTRMWNNCLHVRPLLTQPMALAVYEYENGQIGHMRTPMGPKGQGGLDDATGQAGIGGGVSHKQQSKPIQNTEILEKKDKGAWSLQKALQKMRGAKTKEYDNTVKNE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain