SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84351

Length: 404 nt

UniGene Fasta

>sp_v1.1_unigene84351
GCGAGTTGGGAAGTAGTTTCGCTGGTTTCATTTTTCATCTTTTTACGGTTCCACCATTTTAGCAATATTTGTATTGGGATGTACAATCGCAATCCCAAATCAATATTTCAGTTGTTGACAAAATCTCAAGCATAACTTTACGGAATCTCAAAAGTCTACCAGCAGAGATGTCATATCCTCTACTACTTCTCAAAGCATGTCCTCTGTCAGCACTAGGACAGATGGAAGTAACTCGTCAAATCTGACATCTGAAGGTCAAATTCTGCCTTCAGCCAATCTGAGGGTTTTCAACTTTAACCTGCTGAAAAGTGCTACAAGGAACTTCCGTCCAGACAGTCTTGTAGGGGAAGGAGGCTTTGGTTGTGTTTTCAAGGGATGGATTGATGAACAAGGAACCATGGCAG

Ace file of the UniGene sp_v1.1_unigene84351

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein kinase APK1B, chloroplast precursor, putative (EC:2.7.10.2)	-	-	3.0e-15	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	62%
Blast2go	protein kinase apk1a	-	-	1.43141e-15	81%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	1.43141e-15	81%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	1.43141e-15	81%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LKD8

Fln msg: Unexpected stop codon in the beginning of your sequence, Distance to subject end: 29 aas, your sequence is shorter than subject: 134 - 182

Fln protein: RVGK*FRWFHFSSFYGSTILAIFVLGCTIAIPNQYFSC*QNLKHNFTESQKSTSRDVISSTTSQSMSSVSTRTDGSNSSNLTSEGQILPSANLRVFNFNLLKSATRNFRPDSLVGEGGFGCVFKGWIDEQGTMA

Protein Length: 135

Fln nts: GCGAGTTGGGAAGTAGTTTCGCTGGTTTCATTTTTCATCTTTTTACGGTTCCACCATTTTAGCAATATTTGTATTGGGATGTACAATCGCAATCCCAAATCAATATTTCAGTTGTTGACAAAATCTCAAGCATAACTTTACGGAATCTCAAAAGTCTACCAGCAGAGATGTCATATCCTCTACTACTTCTCAAAGCATGTCCTCTGTCAGCACTAGGACAGATGGAAGTAACTCGTCAAATCTGACATCTGAAGGTCAAATTCTGCCTTCAGCCAATCTGAGGGTTTTCAACTTTAACCTGCTGAAAAGTGCTACAAGGAACTTCCGTCCAGACAGTCTTGTAGGGGAAGGAGGCTTTGGTTGTGTTTTCAAGGGATGGATTGATGAACAAGGAACCATGGCAG

Fln Alignment:

sp_v1.1_unigene84351___GSNSSNLTSEGQILPSANLRVFNFNLLKSATRNFRPDSLVGEGGFGCVFKGWIDEQGT
B8LKD8_______________GSNPSTPKVGDELKVASQLRKFTFNDLKYATRNFRPESLLGEGGFGCVFKGWIEENGT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain