SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84319

Length: 1301 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene84319 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxisomal membrane protein 2 n=2 Tax=Andropogoneae RepID=B6UGE4_MAIZE	-	-	59%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	protein	-	-	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	0.0	68%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Mpv17/PMP22	IPR007248	-	0.0	68%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AAD8

Fln msg:

Fln protein: MGGGTAVPFGGYGGNFPPGWLRLRSRKPATRPATGQNANAGGGGRGQWRFPLKSAMIAGSLVLAGDTIAQLRGRLLVSKTNDENQNSNPEIKDIMVVNSIKHDWLRSLRMATYGFLLYGPGSHAWYDLLDRTFAKRSLKNLLVKVTLNQIVLGPCVIAIVFAWNNLWQGKLKEVPNKYREDAIPALVYGWKFWTPATVLNFWVVPLQARVAFMSCCSVFWNFYLSTTMVKS*

Protein Length: 233

Fln nts: TTGTCGAGTTGACAAAAATACACGTAATTCATGAAAAACTATAAACGGTAATGCACACCATTAACTTACTGTGAGATTCCCTGTACTAGGAACCGGTTCCATAAAGCTTGCGCTACATAAAACTTATTTCTCTTTTGCAAATTTCGA_-_ATGGGAGGAGGCACAGCAGTGCCCTTTGGAGGATACGGTGGGAATTTTCCACCAGGGTGGCTGCGACTGCGCTCCAGGAAGCCTGCAACTCGTCCGGCAACCGGGCAAAATGCTAATGCAGGAGGAGGAGGACGCGGACAATGGCGGTTTCCATTGAAATCGGCCATGATAGCAGGCTCACTTGTCCTAGCAGGCGATACAATCGCCCAGCTCCGGGGCCGTCTCCTTGTTAGCAAAACTAATGACGAGAACCAAAATTCGAACCCCGAGATCAAGGATATAATGGTGGTGAATTCCATAAAACATGATTGGCTAAGGTCTTTGCGGATGGCTACTTATGGATTTCTTTTATATGGTCCTGGTTCACATGCATGGTATGATCTCCTTGATCGGACCTTTGCAAAGCGGTCTTTGAAAAACCTTTTGGTGAAGGTTACTTTGAATCAAATTGTCCTCGGCCCTTGTGTGATTGCTATTGTTTTTGCATGGAATAACCTATGGCAAGGCAAACTTAAAGAGGTCCCCAATAAATATCGAGAGGATGCGATTCCTGCTCTTGTTTACGGATGGAAATTTTGGACTCCTGCCACCGTTCTCAATTTCTGGGTCGTACCACTTCAAGCACGTGTGGCATTTATGTCATGCTGTTCTGTTTTTTGGAATTTCTACCTTTCAACTACCATGGTTAAATCTTAA___GCAACTTCTCTTCAAGAACCATATCTATGGGTATTGATGAATGCTCCTTTCCCATATATGGAAAAGGAAGATGTTTATGCCTAAATGAAATGGCAATGGAGGATAAAGAAGGATGGAAGGTCGAGATATTTTAATAATTCTCATAAATAAAGAATACTAGTCAGTTGTCAAATTTCCCCAATTAACCTGATTTTGCATCAGTTCTGATTGTTATTTGGAGGTGGTATTCGCCATCTTGAGTTTCATTTGTAACTCTTTGAGACTTGGCTGAGTATTGAGTTGCATGAAAGCTCCAAGTTTTGGGTTTCTAGTGTTAAATTTTAAAACACCTTTGCTCGTGTTGCCACACCTGATTCCAATCAATACATGTGAATGATAAACAATGGGATTGGATTGGTTAATTGAACTTTCCTCTGCACTAGAATCTTTGATATTCAGCTTGTGAAGCTCAAGGCAAC

Fln Alignment:

sp_v1.1_unigene84319___MGGGTAVXXXXXXXXXXXGWLRLRSRKPATRPATXXXXXXXXXXXXXXRFPLKSAMIAGSLVLAGDTIAQLRGRLLVSKTNDENQNSNPEIKDIMVVNSIKHDWLRSLRMATYGFLLYGPGSHAWYDLLDRTFAKRSLKNLLVKVTLNQIVLGPCVIAIVFAWNNLWQGKLKEVPNKYREDAIPALVYGWKFWTPATVLNFWVVPLQARVAFMSCCSVFWNFYLSTTMVKS
D5AAD8_______________MGGGIAVPFGGHGGNFQLGWLRRPSRKPASRPATGENANAGGGVRGQWRFPLRSAMTAGSLVLVGDTVAQLRGRLLVNKTNHENQNSNPENKDIMVVNSIKHDWLRALRMTTYGFLLYGPGSHAWYELLDRAFAKRSFKNLLVKVILNQIILGPCVIAVVFAWNSLWQGKLKEVPNKYRKDAIPTLVYGWKFWTPASLLNFWAVPLQARVTFMSCCSIFWNFYLSTTMVKS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain