SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84256

Length: 980 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene84256 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Myosin_tail_1 multi-domain protein	-	-	6.0e-08	22%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	71%
Blast2go	uncharacterized protein	-	-	0.0	82%

Source	GOs	Term	Type	Identity
Blast2go	chloroplast thylakoid membrane	GO:0009535	Cellular Component	82%
Blast2go	mitochondrion	GO:0005739	Cellular Component	82%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	82%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: F6H6M7

Fln msg: Separated hits, possible frame ERROR between 183 and 221, Distance to subject end: 152 aas, your sequence is shorter than subject: 327 - 1079

Fln protein: LLLGYARWLIASSAILARNPASKVFPAMFIENVTELAFDDVTPEDPDFPYIQGLAEAGLIxxxxxxxxxxxxxxSPLSRQDLVSWKIALERKELPEVTRKMLWQKSGFIDIDKIHQDAWPALLADLSSGEQSIVAVAFGYTRLFQPDKPVTKAQAAVALATGEAAELVSEELARIEAESLADTAVATHAALEAQVQKDLNASFEKELQLEREKIEAAERLAEDVRSELERIKGEREEERYSLLKERAALDSEREFLSKLRHELEEQLQVFLTNKLEMSNERDQVDRLLKEAENDKYALDQIRSEVEVEKKALALARAWVEEEATKAR

Protein Length: 328

Fln nts: TTACTATTGGGATATGCCCGTTGGTTAATTGCTTCTAGTGCCATTCTTGCTAGAAATCCAGCATCAAAAGTTTTTCCAGCAATGTTCATTGAGAATGTCACAGAACTTGCTTTTGATGATGTTACACCAGAAGATCCTGACTTCCCATACATTCAAGGATTAGCAGAAGCAGGACTCATTTCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGTCCTCTTTCACGTCAAGATCTTGTCAGTTGGAAGATTGCTTTGGAAAGGAAAGAGTTACCAGAAGTCACTAGGAAGATGTTATGGCAGAAATCTGGATTCATTGATATTGACAAAATACACCAGGATGCTTGGCCTGCTCTGTTAGCAGACCTGTCATCAGGAGAACAGAGCATTGTTGCTGTTGCTTTTGGTTATACTAGGTTGTTTCAACCTGATAAACCAGTCACAAAAGCACAGGCTGCTGTTGCTCTTGCTACTGGAGAGGCAGCAGAACTTGTCTCAGAGGAGCTAGCTCGTATTGAAGCAGAATCATTGGCTGATACTGCAGTTGCAACACATGCTGCTCTAGAAGCTCAAGTCCAGAAGGATCTTAATGCATCCTTTGAAAAGGAGCTTCAATTAGAGAGGGAGAAAATAGAAGCGGCTGAGAGATTAGCTGAAGATGTAAGGTCGGAGTTAGAAAGAATAAAGGGTGAAAGGGAGGAAGAAAGATACTCACTTCTAAAGGAACGGGCTGCACTGGATTCTGAAAGAGAATTTCTTTCAAAACTTAGGCATGAGCTAGAGGAACAACTACAAGTCTTTTTGACAAACAAATTAGAAATGTCCAATGAAAGGGACCAGGTAGACAGACTTTTAAAAGAAGCAGAAAATGATAAATATGCCTTAGATCAAATTCGATCAGAAGTGGAGGTTGAGAAGAAAGCATTAGCTCTGGCCAGGGCTTGGGTGGAGGAAGAGGCCACAAAAGCTAGGG

Fln Alignment:

sp_v1.1_unigene84256___YARWLIASSAILARNPASKVFPAMFIENVTELAFDDVTPEDPDFPYIQGLAEAGLISxxxxxxxxxxxxxSPLSRQDLVSWKIALERKELPEVTRKMLWQKSGFIDIDKIHQDAWPALLADLSSGEQSIVAVAFGYTRLFQPDKPVTKXXXXXXXXXXXXAELVSEELARIEAESLADTAVATHAALEAQVQKDLNASFEKELQLEREKIEAAERLAEDVRSXXXXXXXXXXXXRYSLLKERAALDSEREFLSKLRHELEEQLQVFLTNKLEMSNERDQVDRLLKEAENDKYALDQIRSEVEVEKKALALARAWVEEEATKAR
F6H6M7_______________FARWLVSASSVLSRNTVSKVYPAMYIGNITELAFDDITPEDPDFSSIQGLAEAGLISxxxxxxxxxxxxxSPLSRQDLVSWKMALEKRQLPETDKKVLYQVSGFIDIDSINPDAWPALVADASAGEQGIIALAFGYTRLFQPNKPVTKAQAAIALATGESSDIVSEELARIEAEAMAEKAVAEHSALVDQVEKELNASFEKELSLERKKIDAMEKLAEEARQELEKLRAERDEDNISLIKERAAIESEMEVLSRLRSEVEEQLQSFMSNKVEISYEKERISKLRKEAESENQEIARLQYELEVERKALSMARAWAEDEAKRAR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain