SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84250

Length: 1053 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84250

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ef-hand calcium binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7A1_RICCO	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	95%
Blast2go	ef-hand calcium binding	-	-	84%

Source	InterPros	Term	Type	Identity
Blast2go	Calcium-binding EF-hand	IPR002048	-	84%
Blast2go	EF-hand-like domain	IPR011992	-	84%
Blast2go	EF-Hand 1, calcium-binding site	IPR018247	-	84%
Blast2go	EF-HAND 2	IPR018249	-	84%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LNQ9

Fln msg: Warning!, your query overlaps and the subject is separated,

Fln protein: MSGYPNPPYGASAPPPNHYGAPPPNQYGQPPPNQYGQNAYGQKPHPPAPGGQQPYGYPPQPHGTPYAYPPAQPAFAPGTDPEIIRSFQMCDQDGSGFIDDKELQRALSSANQSFSIRTVHLLMFEFTRNNSMKIGPQEFTSLWHSLQAWRAIFERFDRDRSGKIESMELRDALxxILQILVSKYDKTGQSRGIDYDNFIECSLVVKGLTDKFKEKDKSYVGSATLTYEEYMQIVLPFIVA*

Protein Length: 242

Fln nts: CTGCACGGATCGTAGCTCCAAATATAACCCACAGCCCACTCCCGGACCTAGGCACCGAATTCTTCTCTTTGTAGCTACTCCCTCACCG_-_ATGTCGGGATACCCAAATCCTCCCTATGGAGCTTCAGCTCCTCCTCCGAACCACTATGGCGCCCCTCCCCCTAACCAATACGGGCAGCCTCCCCCTAACCAGTATGGGCAGAACGCTTATGGCCAGAAGCCTCACCCTCCTGCTCCTGGAGGGCAACAGCCCTACGGCTACCCGCCTCAACCTCATGGAACTCCTTACGCATACCCTCCTGCACAGCCAGCATTTGCACCAGGTACTGACCCAGAAATCATAAGGTCTTTTCAGATGTGTGATCAAGATGGGAGCGGATTCATAGATGACAAAGAGTTGCAGAGGGCTTTGTCTTCTGCCAACCAATCATTCAGCATCCGGACAGTTCATCTCCTCATGTTCGAGTTCACCAGAAATAATTCCATGAAAATAGGGCCGCAGGAATTTACATCATTGTGGCACAGTCTCCAAGCGTGGCGGGCAATCTTTGAGAGGTTTGACAGAGATCGTAGTGGGAAGATTGAATCGATGGAATTGAGAGATGCGCTTxxxxxxATTTTGCAAATTCTGGTTTCAAAATATGACAAGACAGGCCAATCCAGGGGAATTGATTATGATAACTTCATAGAGTGCAGCCTTGTTGTTAAGGGACTTACTGATAAGTTCAAGGAGAAAGACAAGAGTTATGTTGGCTCAGCCACTTTGACCTATGAGGAGTACATGCAAATAGTCTTACCATTTATTGTTGCCTAG___AGAGGTTTGACTTAATTATGATACCATAGTTGCATGTAGCTTTATTAGAAAGAGATTGTGCCGTGTGATAATAAAGGTTGCTCTTTTCGCATAGGATTTGTTTGACTTGCATTGTCTGGTTAAAATTGGTTACATGTAACAACTTAAAGAAATTCAATTGTGTCATTATACAGACACAGCGTAGTGTACTTGATGGAGTAATCATATTATCATCATCGCGCTGAGTATAACAGTATTGATAGG

Fln Alignment:

sp_v1.1_unigene84250___GTDPEIIRSFQMCDQDGSGFIDDKELQRALSSANQSFSIRTVHLLMFEFTRNNSMKIGPQEFTSLWHSLQAWRAIFERFDRDRSGKIESMELRDALLxxxxxxxxSILQILVSKYDKTGQSRGIDYDNFIECSLVVKGLTDKFKEKDKSYVGSATLTYEEYMQIVLPFIVA
B8LNQ9_______________GTDPEIIRSFQMCDQDGSGFIDDKELQRALSSASHSFSLRTVHLLMFEFTRNNSMKIGPQEFTSLWHSLQAWRAIFERFDRDRSGKIETMELRDALLxxxxxxxxTILQTLVSKYDKTGQSRGIDYDNFIECSLVVKGLTDKFKEKDKSYVGSASLTYEEFMQIVLPFIVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain