SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84236

Length: 242 nt

UniGene Fasta

>sp_v1.1_unigene84236
ATCTTCTTCAGATCCAGCCACTCAAGGCCTTAAGCATTCAGGAGTGCCCAGTGTCTGTATTTGGGAAATAATGGCATTGGAATGGGTAGTCTTGGGATATGCGGCAGGTTCACAATGCCCGGCCTGGATCGCCTCAGGAAGGGACTGGTAGTCGTTACTCGCAACGCATTGAAGCCGATGCTCTCTGTAGTGCCATTCTGTCTGTTTCTGCTAATGGATATCTACTGGAAATATGAGACAAG

Ace file of the UniGene sp_v1.1_unigene84236

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	erwinia induced protein 2	-	-	1.40639e-20	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	1.40639e-20	91%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PPU4

Fln msg: Distance to subject end: 64 aas, your sequence is shorter than subject: 53 - 130

Fln protein: MGSLGICGRFTMPGLDRLRKGLVVVTRNALKPMLSVVPFCLFLLMDIYWKYET

Protein Length: 54

Fln nts: ATCTTCTTCAGATCCAGCCACTCAAGGCCTTAAGCATTCAGGAGTGCCCAGTGTCTGTATTTGGGAAATAATGGCATTGGA_-_ATGGGTAGTCTTGGGATATGCGGCAGGTTCACAATGCCCGGCCTGGATCGCCTCAGGAAGGGACTGGTAGTCGTTACTCGCAACGCATTGAAGCCGATGCTCTCTGTAGTGCCATTCTGTCTGTTTCTGCTAATGGATATCTACTGGAAATATGAGACAAG

Fln Alignment:

sp_v1.1_unigene84236___TMPGLDRLRKGLVVVTRNALKPMLSVVPFCLFLLMDIYWKYET
C0PPU4_______________TMPGLDRLRKGLVVVTRNALKPMLSVVPFCLFLLMDIYWKYET

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain