SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84213

Length: 1176 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84213

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SMX1_RICCO	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	phosphoglycerate mutase-like protein	-	-	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	79%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histidine phosphatase superfamily, clade-1	IPR013078	-	0.0	79%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ABX9

Fln msg: Overlapping hits, possible frame ERROR between 900 and 858,

Fln protein: MAETPGSGLYPLHHCKTLHLVRHGQGYHNVAGEKDFGAYMSYEYVDACLTPLGWQQVDNLRKHIWKTGIAPRIELVVTSPLMRTMQTAVGVFGGEGYVDGDTCPPLMVAGAGNSNHAAITSANCPPFIAIEWCREHLGVHPCDKRKSISEYQPIFPGIDFSLVETNEDVLWKSDVREKDEEVAARGRTFLNWLLTRKEKEIAVVSHSGFLIHxxxxxxxxxxxxxxxxIHTPYANCELRSLVIADRSAIGTNLPMTDFPGGTPPGPDVPSDYEDVTNLEAEDKVASL*

Protein Length: 289

Fln nts: GATGTCGTTTCTTTTGTTTGGCAGTCCACCTCTTTTGTCTCCTTGTATTAGCAATCTGAAGGTTGGGGACCCTGCGAGGCGGATTTCACAGAGGAATTCAAAGAGGACGTCTGCCATCTGTTGCAGCTCCATTACTAAAGATTTGGGGCAGGAAGTAGAGCAAGTTCTTGATCAAGAACATTCAAACTTTTTGCAATCATGTGTTGAGGATGAATTGAT_-_ATGGCTGAAACTCCAGGTTCAGGTTTATATCCTTTGCACCATTGTAAAACTTTGCACCTGGTAAGGCATGGGCAGGGCTACCATAATGTGGCAGGAGAGAAAGACTTTGGTGCATACATGTCATATGAATATGTCGATGCATGCCTCACTCCTTTAGGATGGCAGCAGGTTGACAATCTTCGTAAGCATATTTGGAAAACTGGCATTGCTCCTAGGATTGAATTGGTCGTGACTTCTCCTTTAATGAGGACTATGCAGACAGCAGTGGGTGTTTTTGGTGGTGAAGGCTATGTAGATGGTGATACATGTCCTCCACTAATGGTGGCTGGTGCTGGCAATAGCAATCATGCTGCAATCACAAGTGCAAATTGTCCACCTTTTATAGCCATTGAATGGTGTCGAGAACATTTGGGAGTGCATCCATGTGACAAGAGGAAAAGCATTAGTGAATATCAGCCCATTTTTCCTGGGATTGATTTTTCTCTGGTAGAAACAAATGAAGATGTTTTGTGGAAGTCAGATGTCAGAGAAAAAGATGAAGAAGTTGCAGCTCGTGGAAGAACTTTTCTTAATTGGTTGTTGACAAGAAAGGAAAAGGAAATAGCAGTCGTTTCGCACAGTGGCTTTCTAATACACxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATCCACACGCCGTATGCAAACTGTGAACTACGTTCTCTTGTTATTGCAGACAGAAGCGCAATTGGAACCAATTTGCCCATGACAGATTTTCCCGGAGGCACTCCACCTGGTCCTGATGTCCCTAGTGATTATGAAGATGTCACAAATTTAGAGGCTGAAGATAAAGTGGCTTCGTTATAA___ATCCAGTTGAAAACAGGATTTTTATAGAATACAAAATTCGTCTCATTGAAACTCAAGTTGTTACAGATGATTTCAGAAAACTGCTTATTTGGAA

Fln Alignment:

sp_v1.1_unigene84213___MAETPGSGLYPLHHCKTLHLVRHGQGYHNVAGEKDFGAYMSYEYVDACLTPLGWQQVDNLRKHIWKTGIAPRIELVVTSPLMRTMQTAVGVFGGEGYVDGDTCPPLMVAGAGNSNHAAITSANCPPFIAIEWCREHLGVHPCDKRKSISEYQPIFPGIDFSLVETNEDVLWKSDVREKDEEVAARGRTFLNWLLTRKEKEIAVVSHSGFLIHTxxxxxxxxxxxxxxEIHTPYANCELRSLVIADRSAIGTNLXXXXXXXXXXXXXXXXXXYEDVTNLEAEDKVASL
D5ABX9_______________MAKTPDSGLYPLHHCKILHMVRHGQGYHNVAGEKDFGAYMSYEYVDASLTPLGWQQVDNLRNHIWKTGFASRIELVVTSPLMRTMQTAVGVFGGGGYIDGDACPPLMVEGAGSSNHAAITSANCPPFIAIEWCREHLGVHPCDKRKSISEYQPLFPGIDFSLVEKNEDVLWKSDVREKEEEVAARGRTFLNWLLTRKEKEIAVVSHSGFLIHTxxxxxxxxxxxxxxEIHTEYANCELRSLVIADRSAIGTNLPTTDFPRGTPPGPDVPSDYDDVKNLEAEDKVASL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain