SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84128

Length: 930 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84128

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	67%
Blast2go	protein	-	-	87%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	87%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	87%
Blast2go	Protein kinase-like domain	IPR011009	-	87%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	87%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	87%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LN87

Fln msg: Distance to subject end: 172 aas, your sequence is shorter than subject: 252 - 424

Fln protein: MHMMRRIKSIASGRSSISDPGGDGGIKRAKFEPETEVEAVGLSKNVAGTSEVSEQHMAVVSVEPSVVAHGTKTRNSGIDQLPKEMHDMKIRDDKGKNPDDKEIEATVVNGNGTETGHIISTTIGGQNGQPKQTIRYRAERIVGTGSFGIVFQATCLETGEAVAIKKVLQDKRYKNRELQIMRMLDHPNIVQLKHCFFSTTDKDELYLNLVLEYVPETVYRVTKYYSRMNQRMPLIYVKLYTYQICRSLAYIH

Protein Length: 253

Fln nts: TTGTAGTAATGAATGGATGTTTGACTGGCGATAGAAAGCGCTCATTACCCTCCATTTCCCTGTGCTCGTCTTTAGGAGAAGAGGACGATGAGACCACCATCTGTTAACACAAGAGCAGAGAGTTGCAGGGTCGCTAAAGAATCCGGACTGCAGTGAGCAGACCGAGGCGTTCCA_-_ATGCATATGATGCGGCGTATCAAGAGCATTGCGTCGGGCCGATCCTCCATCTCAGATCCGGGAGGAGATGGTGGCATAAAAAGGGCTAAATTTGAACCTGAAACAGAAGTGGAGGCCGTTGGGTTATCTAAGAATGTGGCAGGTACAAGTGAAGTCTCGGAGCAGCATATGGCTGTTGTTTCTGTAGAGCCCTCTGTGGTTGCACATGGTACAAAAACTAGAAATTCTGGTATTGACCAACTTCCAAAGGAAATGCATGATATGAAAATAAGGGATGATAAAGGCAAGAATCCAGATGACAAGGAAATTGAGGCCACAGTTGTCAATGGCAATGGGACGGAGACTGGCCACATAATTTCAACAACAATAGGTGGTCAAAATGGGCAGCCAAAACAGACCATCAGATACAGGGCAGAACGTATTGTGGGCACTGGGTCATTTGGTATTGTTTTCCAGGCCACATGCTTAGAAACTGGAGAGGCTGTTGCCATAAAAAAAGTGCTGCAGGATAAGAGATACAAGAATAGAGAACTGCAAATTATGCGCATGCTTGACCATCCTAATATTGTTCAACTCAAACATTGTTTCTTTTCAACTACGGACAAAGATGAATTATATCTCAACCTTGTATTGGAGTATGTACCTGAAACAGTGTATCGAGTTACAAAATACTATAGTAGGATGAACCAACGTATGCCATTGATATATGTCAAACTATACACCTATCAGATATGTCGTTCTCTGGCTTACATCCAT

Fln Alignment:

sp_v1.1_unigene84128___MHMMRRIKSIAXXXXXXXXXXXXXXXKRAKFEPETEVEAVGLSKNVAGTSEVSEQHMAVVSVEPSVV-AHGTKTRNSGIDQLPKEMHDMKIRDDKGKNPDDKEIEATVVNGNGTETGHIISTTIGGQNGQPKQTIRYRAERIVGTGSFGIVFQATCLETGEAVAIKKVLQDKRYKNRELQIMRMLDHPNIVQLKHCFFSTTDKDELYLNLVLEYVPETVYRVTKYYSRMNQRMPLIYVKLYTYQICRSLAYIH
B8LN87_______________MNVMRRLRSLASGRSSVTDPGGDAGTKRAKFELEREADTSEPLGVVARTSEASHQQDVVVGLKGTLRNILVPEFENVDVDWLPKEMHEMKIKDDNVNN-GGKEIIPGVVNGNGMETGHIIATTIGGLNGQPKQTISYMAERVVGTGSFGIVFQAKCLETEEIVAIKKVLQDKRYKNRELQIMRMLDHPNIVQLKRFFYSATDKDDLYLNLVLGYVPETVYRIVKHFNRVKQQVTLIYVKLYTYQIFRALAYIH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain