SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84089

Length: 1196 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene84089 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	uncharacterized protein	-	-	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitochondrion	GO:0005739	Cellular Component	0.0	71%
Blast2go	plastid	GO:0009536	Cellular Component	0.0	71%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NXH5

Fln msg:

Fln protein: MAAGKAVQKLLVRAGINSSPLQSSSIFSQISFASSPVCRPSFDRFVGTWSLVNCISSPKPNVLHPISLELVKNRFPKESILGRCAPWNVKNEGFHSLGDERLPKRRPCMKKRNKRAYLRPKGPYYWIQYTPGEPIPHSRPNEGSVRGRNHRKRMEQRAAFRSKEAQKRKDQLAGARRRKAIKKIESKMAAVARERAWAERLVQLQQAEAEAGRTTT*

Protein Length: 218

Fln nts: ATTGGGGTAACCAGGGAAATTCAAGAATTTGCATTAAGCGGTAATGCTCCAAAAAAATTTGCCGTCTATATTTTTTACAGAAGTTCCAAATAAAATTTGATTTGTTTTCTTATTGAAGAGTATTCGCAGTCGAACTTGGTAACTTACAATACATGATCTGCTATTCTCTGATAATTATGTACAGTCTGAAATGGCAGCTCGAATTCGAACGTGGTAACTAATTAGACATAGCGATTTGCTATTCTCTGATAATCTTCTAGAGGCCGTA_-_ATGGCAGCGGGAAAAGCAGTGCAAAAGTTGCTGGTACGCGCGGGCATCAACTCCTCCCCGTTACAATCTTCATCTATTTTCTCACAAATCTCCTTTGCATCGAGTCCGGTTTGCAGGCCTTCATTTGACCGATTTGTAGGAACCTGGTCTCTGGTCAATTGCATTTCGTCGCCAAAGCCCAATGTACTTCACCCCATATCCCTAGAGTTAGTAAAAAACAGGTTCCCGAAGGAATCGATCCTTGGTCGTTGCGCACCATGGAATGTGAAGAACGAGGGGTTCCATAGCCTGGGAGATGAGCGTCTGCCCAAGCGGAGGCCATGCATGAAGAAGCGCAATAAACGAGCCTACCTGAGACCGAAAGGTCCGTACTACTGGATTCAGTACACTCCCGGTGAGCCCATACCACACAGTCGGCCAAACGAGGGCAGCGTCCGGGGAAGAAATCATCGCAAACGGATGGAGCAAAGAGCTGCTTTTCGATCGAAAGAAGCTCAAAAACGGAAGGACCAATTGGCAGGAGCTAGAAGAAGGAAAGCGATTAAAAAGATAGAGAGCAAGATGGCTGCTGTTGCAAGGGAGAGAGCCTGGGCTGAAAGGCTAGTGCAATTGCAGCAAGCTGAAGCTGAGGCAGGAAGAACTACAACTTGA___TATCCACTGGAGGAAACTCCTTCACAACTTATATATCAAGATAGACCAATGGCAGGACTTATGGGGATTATATGAACAATGGTTGAGTTTGGGAGACAGATAAGCATCATCTTGGTATTACTTTTTCATTAATGATCCAAATTTTGGCTACTATTCTGGTCCTCACTATGTTTAAATGGTGTGGCTGTTCAATGATTTGCCACAGAATTTTAGCAGTTTTCACACAACCAGTATATACTATCAAGTTTTAACCATAAGTGATTTGTGCACATATCAC

Fln Alignment:

sp_v1.1_unigene84089___MAAGKAVQKLLVRAGINXXXXXXXXXXXXXXXXXXPVCRPSFDRFVGTWSLVNCISSPKPNVLHPISLELVKNRFPKESILGRCAPWNVKNEGFHSLGDERLPKRRPCMKKRNKRAYLRPKGPYYWIQYTPGEPIPHSRPNEGSVRGRNHRKRMEQRAAFRSKEAQKRKDQLAGARRRKAIKKIESKMXXXXXXXXXXXRLVQLQQAEAEAGRTT
A9NXH5_______________MAARKAVQKLLVRAGINSFPIQSSSIFSQISSASSPICRPSFDRFLGTLSQINYISSPKPTVLSPISLELVRNGFPWESIPGRRPPWNVKNEGFHSLGDERLPKRRPCMKKRNKRAYLRPKGPHYWIQYTPGEPIPHSRPNEGSVRGRNHRKRMEQRSAFRSGEAQKRKDQLAGARRRKAIKKIESKMAAVARERAWAERLVQLQQAEAEAGRTT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain