SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene84001

Length: 1129 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene84001

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Sodium-bile acid cotransporter, putative n=1 Tax=Ricinus communis RepID=B9RBV8_RICCO	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	46%
Blast2go	at4g12030-like protein	-	-	80%

Source	GOs	Term	Type	Identity
Blast2go	response to jasmonic acid stimulus	GO:0009753	Biological Process	80%
Blast2go	response to wounding	GO:0009611	Biological Process	80%
Blast2go	glucosinolate biosynthetic process	GO:0019761	Biological Process	80%
Blast2go	transporter activity	GO:0005215	Molecular Function	80%
Blast2go	plastid	GO:0009536	Cellular Component	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Bile acid:sodium symporter	IPR002657	-	0.0	80%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NX39

Fln msg: Distance to subject end: 59 aas, atg_distance in limit (1-15): atg_distance = 2, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 326 - 433

Fln protein: MNIQQAAPGSRAPLVLPRDDQFSSAILHRQVLLLRRSVYSQSTYHASTTKKTWESRSSPVNSGFPLLLCQNAYRKSRIRSGNSEFIVGDEERPKEEELQLSKGSTLNMVNVLKVLKDANSVIPHVVAASTILALIFPPSFTWFTNRFWNNINIMCQWAQLSNYATYLTDPTMAPLSIVMTALSTASAVVVTPMLTLLLLGKRLPVDVQGMMSSIMQIVIAPVAAGLLLNKFAPRFCSFVRQLLPPVSVFVTALCVGSPLAMNINTIRSTFGLTILVPVVGFHALAFVIGYVMPGFAFSKSPDMKGLQRTISFETGMQSSLLGLALA

Protein Length: 327

Fln nts: ATGGGACTGCCTAGGGCTGATTTGATCCACTTTGCTGTTATACATCTTAAATTGAAACCCGCGAGAGATCAGCCGGGCATATAGCTCCACGTGGGTTCATTCCATCAGTTGCTGGTGGCTTGATTTTGGTTTGAGCTTCACTTCCCGCC_-_ATGAATATCCAACAAGCAGCCCCGGGTAGCAGAGCACCATTGGTTCTTCCAAGGGACGATCAGTTTTCATCGGCAATTCTTCATCGACAGGTTCTTCTCTTGAGACGATCGGTCTACTCGCAATCAACGTATCATGCCTCGACAACAAAAAAAACGTGGGAATCAAGGTCGTCTCCAGTAAACTCCGGGTTTCCTCTCTTACTCTGTCAAAATGCATATAGAAAGTCCCGTATTAGAAGTGGGAATTCAGAATTTATAGTTGGTGACGAAGAACGGCCCAAGGAAGAGGAACTCCAGTTATCCAAGGGTTCTACTTTGAATATGGTCAATGTTCTAAAGGTGCTGAAAGATGCAAACTCCGTTATTCCACATGTAGTTGCAGCAAGTACAATATTGGCTCTTATATTCCCACCATCTTTTACCTGGTTCACAAACAGGTTCTGGAATAATATTAACATCATGTGTCAGTGGGCACAACTTTCAAATTATGCAACATATTTGACAGACCCTACGATGGCTCCTTTGAGCATCGTGATGACTGCTTTATCAACTGCTTCAGCAGTTGTAGTTACGCCGATGCTTACACTTCTTCTGTTAGGCAAACGATTGCCAGTTGATGTACAAGGAATGATGTCGAGTATTATGCAAATCGTAATTGCACCTGTTGCAGCGGGCTTGCTTCTAAATAAGTTCGCACCCCGATTTTGTTCATTTGTTCGACAACTGCTGCCACCAGTATCGGTATTTGTAACGGCTCTTTGTGTTGGGTCACCACTGGCAATGAACATCAATACAATTCGTTCTACTTTTGGCCTTACCATACTTGTACCTGTTGTTGGATTTCATGCATTAGCTTTTGTAATTGGTTATGTTATGCCTGGCTTTGCCTTTTCCAAATCACCTGATATGAAAGGCCTTCAGAGAACTATTTCATTCGAGACAGGAATGCAAAGCAGCCTTTTGGGTCTTGCCCTTGCAAT

Fln Alignment:

sp_v1.1_unigene84001___AQLSNYATYLTDPTMAPLSIVMTALSTASAVVVTPMXXXXXXGKRLPVDVQGMMSSIMQIVIAPVAAGLLLNKFAPRFCSFVRQLLPPVSVFVTALCVGSPLAMNINTIRSTFGLTILVPVVGFHALAFVIGYVMPGFAFSKSPDMKGLQRTISFETGMQSSLLGLALA
A9NX39_______________AQLSTYASFLSKGDVA-LSIVLTSLTTISSVIITPVLTGLLIGSVVPVDAIAMSKSILQVVLIPVALGLALNTYAKPFVNLIRPFMPLMAMVCTSLCIGSPLALNQSQIISMEGLQLVFPVLSFHTFAFVIGYWVAKLPLLRQEE--NVCRTISLCTGMQSSTLAGLLA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain