SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83869

Length: 292 nt

UniGene Fasta

>sp_v1.1_unigene83869
CATTCCTATTCTTTTCCACAAGCAAGTTGTATTCTTTGTAGACAGTGTTCCGATTAGGGTATTCCCCAACAACGAGAGGCTGGGAGTCCCAATGAGGGTATCCTCTTCAATCTGGAATGCAGATAACTGGGCTACTCAAGGTGGGCGGCTGAAGATAAACTGGAGCCATTCTCCTTTTATCTCCACTTACAAAGGATGCAAACGAATACGGATTAAATGGAGAATCAAGAGGGGTTGTTGAGAATGGAAGTAAGTGGTGGGATAGGCCCTCTCATTCTTCCCTTACTCCATT

Ace file of the UniGene sp_v1.1_unigene83869

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative xyloglucan endotransglucosylase/hydrolase n=1 Tax=Selaginella kraussiana RepID=Q1XD17_9TRAC	-	-	4.0e-19	60%
FL-Next	tr=Putative uncharacterized protein xyloglucan endotransglucosylase; Pinus pinaster (Maritime pine).	-	-	0.0	89%
Blast2go	xyloglucan endotransglucosylase hydrolase	-	-	2.96234e-42	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycoside hydrolase, family 16	IPR000757	-	2.96234e-42	78%
Blast2go	Concanavalin A-like lectin/glucanase	IPR008985	-	2.96234e-42	78%
Blast2go	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	2.96234e-42	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: F4MKM0

Fln msg: Warning!, your query overlaps and the subject is separated, Distance to subject end: 36 aas, your sequence is shorter than subject: 97 - 286

Fln protein: IPILFHKQVVFFVDSVPIRVFPNNERLGVPMRVSSSIWNADNWATQGGRLKINWSHSPFISTYKxxANEYGLNGESRGVVENGSKWWDRPSHSSLTP

Protein Length: 98

Fln nts: CATTCCTATTCTTTTCCACAAGCAAGTTGTATTCTTTGTAGACAGTGTTCCGATTAGGGTATTCCCCAACAACGAGAGGCTGGGAGTCCCAATGAGGGTATCCTCTTCAATCTGGAATGCAGATAACTGGGCTACTCAAGGTGGGCGGCTGAAGATAAACTGGAGCCATTCTCCTTTTATCTCCACTTACAAAxxxxxxGCAAACGAATACGGATTAAATGGAGAATCAAGAGGGGTTGTTGAGAATGGAAGTAAGTGGTGGGATAGGCCCTCTCATTCTTCCCTTACTCCATT

Fln Alignment:

sp_v1.1_unigene83869___HKQVVFFVDSVPIRVFPNNERLGVP------MRVSSSIWNADNWATQGGRLKINWSHSPFISTYKGxxxDANEYGLNGESRGVVENGSKWWDRPSHSSLTP
F4MKM0_______________HKQVVFFVDSVPIRVFPNNERVGVPYPKKQPMRVSSSIWNADNWATQGGRLKINWSHSPFISTYKGxxxDANEYGLNGESRGVIENGSKWWDRPSHSSLTP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain