SustainPineDB

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Assembly info
Unigenes
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83739

Length: 516 nt

UniGene Fasta

>sp_v1.1_unigene83739
GAGCATTCCGGTACATCACAGGGAAATGATGATGCAGCCCATGGAGGTAACAGTGAACTCAGAGAGCTTCCACAGGTGGAGCTAACGACACTTCCTCTAATCTTGAAGACTGTAATGGAGGGCTGTATTATGGATCATATTCGGGTGGCTGAGCTTATAGTTCAAAATCAAACATTTATACCGAAGCTTCTTGATTTGTTCAAAATATGTGAAGATTTGGAGAACAATGATGGCCTTCATTTGATATTTAAAATTGTCAAAGGAATCATTCTATTGAATAATACACAAATCTTCGAAAAACTATTCAGCGAAGAGTATATAATGGATATTGTGGGTGCGCTTGAGTATGATCCAGATATTCCTTTTCACCAGGAACATCGCGCTTTTCTAAGGGAGCAGGTTTTATTCAAGGAGGCAATCCCAATCAGAGATCTTTCTTTATTATCAAAAATCCATCAAACATATAAAATTAGCTACATAAAGGATGTTATTTTACCGAGAGTTTTGGATGAGTCC

Ace file of the UniGene sp_v1.1_unigene83739

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	binding	-	-	63%
FL-Next	tr=Putative uncharacterized protein P0487E11.32-2; Oryza sativa subsp. japonica (Rice).	-	-	64%
Blast2go	protein	-	-	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Domain of unknown function DUF625	IPR006887	-	0.0	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q5Z8F1

Fln msg: Distance to subject end: 71 aas, your sequence is shorter than subject: 172 - 363

Fln protein: EHSGTSQGNDDAAHGGNSELRELPQVELTTLPLILKTVMEGCIMDHIRVAELIVQNQTFIPKLLDLFKICEDLENNDGLHLIFKIVKGIILLNNTQIFEKLFSEEYIMDIVGALEYDPDIPFHQEHRAFLREQVLFKEAIPIRDLSLLSKIHQTYKISYIKDVILPRVLDES

Protein Length: 173

Fln nts: GAGCATTCCGGTACATCACAGGGAAATGATGATGCAGCCCATGGAGGTAACAGTGAACTCAGAGAGCTTCCACAGGTGGAGCTAACGACACTTCCTCTAATCTTGAAGACTGTAATGGAGGGCTGTATTATGGATCATATTCGGGTGGCTGAGCTTATAGTTCAAAATCAAACATTTATACCGAAGCTTCTTGATTTGTTCAAAATATGTGAAGATTTGGAGAACAATGATGGCCTTCATTTGATATTTAAAATTGTCAAAGGAATCATTCTATTGAATAATACACAAATCTTCGAAAAACTATTCAGCGAAGAGTATATAATGGATATTGTGGGTGCGCTTGAGTATGATCCAGATATTCCTTTTCACCAGGAACATCGCGCTTTTCTAAGGGAGCAGGTTTTATTCAAGGAGGCAATCCCAATCAGAGATCTTTCTTTATTATCAAAAATCCATCAAACATATAAAATTAGCTACATAAAGGATGTTATTTTACCGAGAGTTTTGGATGAGTCC

Fln Alignment:

sp_v1.1_unigene83739___EHSGTSQGNDDAAHGGNSELRELPQVELTTLPLILKTVMEGCIMDHIRVAELIVQNQTFIPKLLDLFKICEDLENNDGLHLIFKIVKGIILLNNTQIFEKLFSEEYIMDIVGALEYDPDIPFHQEHRAFLREQVLFKEAIPIRDLSLLSKIHQTYKISYIKDVILPRVLDE
Q5Z8F1_______________EASRVLHSNDESFRSVNGELRELPPVELSNLPLILKTILEGGITDQMRVAELITQDREFFPKLLDIFRICEDLENLDDLHMIFKLVRGIILLNSSSIFDKIFSDEFILDIIGALEYDPDVPKVQKHRAFLKDHVVFKEAIPIKNVSVVSKIHQTYRIGYLKDVILPRVLDD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain