SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83687

Length: 843 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83687

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	tho2 protein, putative; K12879 THO complex subunit 2	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	80%
Blast2go	protein	-	-	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	THO complex, subunitTHOC2, C-terminal	IPR021418	-	0.0	82%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: tr_plants

Fln subject: F6HC41

Fln msg: Distance to subject end: 137 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 267 - 412

Fln protein: FFFELVLHLGTNSKSIMWLDLLGTVHSMLPSKAWNSLSPELYVTFWGLTLYDLYVPKKRYESELAKQHAALKALEEISDNSHSAIAKRKKDKERIQEVLDRLSSEFQKQEQNVAAVHQRLVREKDFWLTSCPDSLKINMEFLQRCIFPRCVLSMPDAVYCAKFVHTLHSLGTPFFNTVNHIDVLICKALPPMICCCTDFEAGRLGRFLYETLKMAYYWKSDESIYERECGNMPGFAVYYRDPNSQRVTFAQYIKVKHWKWSGRITRL

Protein Length: 268

Fln nts: AGTGGCTCAGTTAGATGGTAGTAAAGAGATGGAGCACTGTAATTCTTCTTTGAACTGGTTCTGCATCTTGGAACAAACTCAAAGTCTATCATGTGGTTAGACTTGCTTGGAACAGTTCATTCAATGTTGCCTTCAAAAGCTTGGAACAGTCTTTCTCCAGAGTTGTATGTTACATTTTGGGGACTTACATTATATGATTTATATGTTCCTAAAAAACGATATGAATCAGAGCTTGCTAAGCAGCATGCTGCTCTCAAAGCTCTTGAGGAGATATCTGACAATTCGCATAGTGCTATTGCTAAACGTAAGAAAGACAAGGAAAGGATTCAAGAGGTCTTGGATAGACTAAGTAGTGAATTTCAAAAGCAAGAACAGAATGTTGCAGCTGTACATCAGCGACTTGTACGTGAAAAGGACTTTTGGTTGACTTCTTGCCCAGACTCTTTAAAAATCAACATGGAGTTCTTACAGCGTTGTATCTTCCCACGTTGTGTTCTTAGCATGCCAGATGCAGTGTACTGTGCCAAGTTTGTGCACACTCTGCACTCACTTGGTACACCATTCTTTAACACCGTCAACCACATTGATGTTCTTATATGTAAAGCTTTACCACCGATGATATGCTGCTGCACAGATTTTGAAGCAGGTAGACTTGGGAGGTTTTTGTATGAAACATTGAAGATGGCATATTACTGGAAGAGTGATGAGTCAATTTATGAGCGAGAGTGTGGCAACATGCCAGGCTTTGCTGTTTATTACAGGGATCCAAACAGCCAACGGGTTACCTTTGCACAGTATATTAAAGTTAAACATTGGAAGTGGAGTGGGCGGATTACACGTTTA

Fln Alignment:

sp_v1.1_unigene83687___ELVLHLGTNSKSIMWLDLLGTVHSMLPSKAWNSLSPELYVTFWGLTLYDLYVPKKRYESELAKQHAALKALEEISDNSHSAIAKRKKDKERIQEVLDRLSSEFQKQEQNVAAVHQRLVREKDFWLTSCPDSLKINMEFLQRCIFPRCVLSMPDAVYCAKFVHTLHSLGTPFFNTVNHIDVLICKALPPMICCCTDFEAGRLGRFLYETLKMAYYWKSDESIYERECGNMPGFAVYYRDPNSQRVTFAQYIKVKHWKWSGRITRL
F6HC41_______________EVILDLGPPWKPIVWSDLLDTARTMLPSKAWNNLSPDLYASFWGLTLYDLYVPRHRYESEIAKQHSALKALEELSDNSNSAITKRKKDKERIQESLDRLTSELQKHEENVASVRRRLAREKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETMKIAYYWKSDESIYERECGNMPGFAVYYRYPNSRRVTYGQFIKV-HWKWSQRITRL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain