SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83556

Length: 1373 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83556

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Expansin 2 n=1 Tax=Cunninghamia lanceolata RepID=A1Z1N8_CUNLA	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	expansin	-	-	90%

Source	InterPros	Term	Type	Identity
Blast2go	Expansin	IPR002963	-	90%
Blast2go	Expansin/pollen allergen, DPBB domain	IPR007112	-	90%
Blast2go	Pollen allergen/expansin, C-terminal	IPR007117	-	90%
Blast2go	Expansin/Lol pI	IPR007118	-	90%
Blast2go	Barwin-related endoglucanase	IPR009009	-	90%
Blast2go	Barwin-like endoglucanase	IPR014733	-	90%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NW93

Fln msg:

Fln protein: MGMGIPVHFPTIVLLFIVRACLVYGRIPGVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRI*

Protein Length: 264

Fln nts: GAATATTTGCAGCATTTGCCTTTGTTATGGTTTGTTATGGGGTATTCTTCAATGCATTCTTGAAATGCGGGTTGTTTGCCCTTGACTGACTGGTTCTTTCTTTTGCAGAACG_-_ATGGGAATGGGAATTCCAGTGCATTTTCCGACCATTGTGTTGCTGTTTATCGTTAGAGCTTGTCTGGTGTATGGGCGAATCCCGGGTGTTTATCAGCCTGGGCCTTGGAATGAAGCACATGCAACTTTCTACGGTGGAAGCGATGCCTCGGGCACCATGGGGGGTGCTTGTGGGTATGGCAACCTGTACAGCCAGGGATATGGAGTTCAATCGGCAGCATTGAGCACAGCTCTGTTCAACAGCGGGCTAAGCTGTGGAGCCTGCTTTGAGATCAAATGTGTGAATGACCCAGAATGGTGTCACCCGGGTAACCCTTCGATTTTGGTCACGGCCACCAATTTCTGCCCTCCCAACTATGCGCTGCCTAACGACAATGGCGGCTGGTGCAATCCTCCTCGCCCCCATTTTGATCTCTCCATGCCAATTTTCCTCAAGATGGCCGAGTACCGTGCCGGAATTGTGCCAGTTCTCTTCAGAAGAGTGCCGTGCGTGAAGCAAGGGGGAGTGAGATTCACCATCAATGGCTTCAAATACTTCAACCTGGTTCTCATCACAAATGTGGCTGGAGCAGGGGACTTGGTGAGAGTGAGCGTGAAGGGTAGCCAGACAGGGTGGATTCCATTGTCCAGAAACTGGGGCCAAAATTGGCAATGCAGCACCGTCCTGGTCGGGCAGAGCCTCTCCTTCAGAATAACTGGCAGTGACCGCAGGACCTCTACATCCTGGAACATTGTGCCTCCAAATTGGGAGTTTGGCCAGACCTTTTCAGGAAAGCAGTTCAGAATCTGA___TTACAATAGATTCTTCAACATGTGCTGCTTCTCTCTATCTATCTATCTAGATTTGTATTTGTCAATCGAACGAAGGGATTCCTAATCGGTTTCTTCCACTCAATAGCTTATTGACACAACGATAAGTTGTTGTTGCTTTTGTTCCTTTTTTCTCCCTTATATTTTGAGCTTAACCTTCTTCCCCAGTGCGGGCGCGGCCGAGGTTGCGAAAGAAAAGCAACCCGCATTATGTATACAGTCCTAATTCCTACTAATAAGTCATGTCCTGTCCAGTCCAGTCCAGTCATGTCCCACTTATGGTATAGCCATCTATCATTCTGGTGTTTAATTGTCTGGTTCTAGAAAACAAGAAATCAGAGCCAAGCTTAGCTGTGTAATGTGTAGCTATTTTTGGGGAAGAAGCTGTTGGTAATGGTATTGGTAGTGGTTTAAGCAGGAGTGAGTGTGGTGTGTGACAACTACAGCCCATTTT

Fln Alignment:

sp_v1.1_unigene83556___MGMGIPVHFPTIVLLFIVRACLVYGRIPGVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEWCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFR
A9NW93_______________MGMGIQALVHTFWLLIVGRFCLVYGRIPGVYQPGPWNEAHATFYGGSDASGTMGGACGYGNLYSQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPQWCHPGNPSILITATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLRMAEYRAGIVPVLFRRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQCSTVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQFR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain