SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83479

Length: 1264 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83479

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Aspartic proteinase nepenthesin-2, putative n=1 Tax=Ricinus communis RepID=B9SD00_RICCO	-	-	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	53%
Blast2go	protein	-	-	51%

Source	InterPros	Term	Type	Identity
Blast2go	Peptidase A1	IPR001461	-	51%
Blast2go	Peptidase aspartic, catalytic	IPR009007	-	51%
Blast2go	Peptidase aspartic	IPR021109	-	51%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: D5AC09

Fln msg: STOP codon was not found. Distance to subject end: 10 aas, your sequence is longer than subject: 415 - 370

Fln protein: MVAVKLKLMFLVILPLQLCATLSQQKEHEIDGVSMSLHMKMRMKSGSTKKITVKEPLYYPSDFIEYYIKLSVGTPPQDLFLLMDTGSHVVWASCTTNYTCNNCRGYITPFLPTRSSSAVHVKCADPNCKELCENNHCVKSFQKCSRICPQFSLTYGSGNMTGRLLSDTLTLPLEDGGRREIKNFAIGCSVVSSQFAGIAGFGRGGLPMPSQLAPLIGDKFAYCLDYVNNGSKIVLGNKAVARDIALTYIPLLINPMNPIFYYLGLQAVSIGAKRLTLPSNLLSFDSHGNGGTAIDSGSSVTHFPDSIYKQIVGVFASQTRYRRSPRDEVDTGLGLCYNVSGVENIRWPKFAFHFNGGSQMVLPDENAFFPGSSDDIFCLAMLNGGTDVNGPAVLMGNFQQNNFYILYDREKNRLG

Protein Length: 416

Fln nts: TTCCCTGAGAATTGGCACC_-_ATGGTGGCCGTCAAGTTGAAGCTGATGTTCCTGGTTATCCTCCCACTGCAACTCTGTGCAACATTGTCTCAACAGAAGGAGCATGAAATTGATGGAGTGTCGATGAGCCTGCACATGAAGATGAGGATGAAGAGCGGGTCTACAAAAAAGATCACTGTGAAGGAGCCTCTCTACTATCCGAGCGACTTCATCGAGTATTACATCAAATTGTCGGTGGGTACTCCTCCACAGGATCTATTCCTCCTGATGGACACGGGCAGTCATGTTGTGTGGGCATCCTGCACCACAAATTATACATGTAACAATTGCCGTGGATACATAACGCCTTTTCTTCCCACCAGGTCATCATCTGCAGTTCATGTGAAGTGCGCAGATCCGAACTGCAAAGAGCTGTGCGAGAATAATCACTGCGTCAAAAGCTTCCAGAAGTGCTCGCGGATTTGTCCACAATTTAGCCTTACCTATGGCTCCGGAAACATGACGGGGCGTTTACTGAGTGACACCTTGACTTTGCCACTGGAAGACGGAGGAAGACGAGAAATAAAAAACTTCGCAATTGGATGTTCAGTGGTTTCGTCCCAGTTTGCTGGTATTGCAGGATTTGGCAGAGGAGGACTGCCTATGCCTTCCCAGCTTGCTCCACTTATTGGCGATAAATTTGCGTATTGCCTTGACTATGTGAACAACGGCAGCAAGATAGTGCTGGGTAACAAGGCGGTTGCCAGGGATATCGCCTTGACTTACATCCCCCTTCTCATCAACCCAATGAACCCTATTTTCTATTACCTTGGCCTCCAAGCGGTGAGTATTGGTGCAAAGCGCTTGACGCTGCCCTCCAATTTATTGTCATTTGACAGCCATGGCAATGGCGGAACCGCAATAGATTCTGGGAGTTCTGTCACTCACTTTCCCGATTCAATTTATAAGCAGATTGTAGGTGTATTTGCTTCTCAGACTCGATATCGAAGATCTCCTAGAGATGAAGTTGATACTGGTTTAGGATTGTGTTACAATGTGTCCGGCGTAGAGAATATTCGGTGGCCTAAATTTGCATTTCATTTCAACGGTGGCTCACAGATGGTACTGCCTGATGAGAATGCTTTCTTTCCTGGTAGTTCTGATGATATATTCTGCTTGGCAATGCTGAATGGTGGCACTGACGTTAACGGACCTGCCGTTCTCATGGGGAACTTTCAGCAGAACAATTTCTATATATTGTATGATAGAGAGAAGAATCGTTTGGGC

Fln Alignment:

sp_v1.1_unigene83479___MDTGSHVVWASCTTNYTCNNCRGYITP---FLPTRSSSAVHVKCADPNCKELCENN------HCVKSFQKCSRICPQFSLTYGSGNMTGRLLSDTLTLPLEDG-GRREIKNFAIGCSVVSSQF-AGIAGFGRGGLPMPSQLAPLIG-DKFAYCL-----DYVNNGSKIVLGNKAVARDIALTYIPLLINPMNP------IFYYLGLQAVSIGAKRLT-LPSNLLSFDSHGNGGTAIDSGSSVTHFPDSIYKQIVGVFASQTRYRRSPRDEVDTGLGLCYNVSGVENIRWPKFAFHFNGGSQMVLPDENAFFPGSSDDIFCLAMLN--GGTDV-NGPAVLMGNFQQNNFYILYDREKNRLG
D5AC09_______________MDTGSDLVWVPCTRNYSCINCPEDSASNGVFLPRMSSSLHLVTCADSNCKTLYGNNTELLCQSCAGSLKNCSETCPPYGIQYGRGSTAGLLLTETLNLPLENGEGARAITHFAVGCSIVSSQQPSGIAGFGRGALSMPSQLGEHIGKDRFAYCLQSHRFDEENKKSLMVLGDKALPNNIPLNYTPFLTNSRAPPSSQYGVYYYIGLRGVSIGGKRLKQLPSKLLRFDTKGNGGTIIDSGTTFTVFSDEIFKHIAAGFASQIGYRRAGEVEDKTGMGLCYDVTGLENIVLPEFAFHFKGGSDMVLPVANYFSYFSSFDSICLTMISSRGLLEVDSGPAVILGNDQQQDFYLLYDREKNRLG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain