SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83459

Length: 1134 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83459

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Dihydroflavonol 4-reductase n=2 Tax=Populus RepID=B9GRL5_POPTR	-	-	54%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	53%
Blast2go	dihydroflavonol 4-reductase	-	-	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	NAD-dependent epimerase/dehydratase	IPR001509	-	0.0	66%
Blast2go	NAD(P)-binding domain	IPR016040	-	0.0	66%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NNA9

Fln msg: Separated hits, possible frame ERROR between 396 and 404, query STOP codon too far from subject stop. Distance to subject end: 106 aas, putative chimeric sequence, atg_distance in limit (1-15): atg_distance = 14, W2: There is no M at the beginning, your sequence is shorter than subject: 225 - 351

Fln protein: GDEACEENKRVVCVTGANGYIGSWLVMRLLEHGYYVHGTVRDPEDPGKVGHLLGLPGASEKLKLFKADLNNEMAFDDAVSGCQGVFHVAKPVNLDSNALQGEVVGPAVRGTVNLLRACERSGTVKRVIHTSxxxxQPPDTVLDESHWTSVEYCRKTKMVGWMYYIANTYAEEGAHKFGSENKMDVISILPAITVGDFLTLQIPGSVATLMALPNLTPHVSLTYT*

Protein Length: 226

Fln nts: GGAG_-_ATGAAGCATGCGAAGAGAACAAGCGAGTGGTTTGTGTAACAGGGGCAAATGGGTACATCGGCTCTTGGCTGGTCATGAGATTACTGGAACATGGCTATTATGTTCATGGAACTGTCAGGGACCCAGAAGACCCAGGGAAGGTTGGGCATTTGCTGGGGCTTCCAGGGGCAAGTGAGAAGCTAAAGCTGTTCAAGGCAGATCTCAACAACGAAATGGCCTTTGATGATGCTGTGAGCGGTTGTCAAGGAGTTTTCCATGTTGCCAAGCCTGTTAATCTGGACTCAAACGCTCTTCAGGGGGAGGTTGTTGGTCCTGCGGTGAGGGGAACAGTAAATCTGCTTCGGGCCTGCGAACGATCGGGCACTGTGAAACGAGTGATACATACCTCGTCxxxxxxxxxGCAGCCCCCTGATACTGTGCTGGATGAATCTCATTGGACATCGGTCGAGTATTGCAGAAAGACAAAGATGGTCGGATGGATGTACTACATCGCCAACACTTATGCAGAAGAGGGAGCCCATAAGTTCGGATCAGAGAACAAAATGGACGTTATCAGCATCCTACCAGCAATCACTGTGGGGGATTTTCTCACTCTTCAGATCCCAGGCAGCGTGGCTACTCTCATGGCGTTGCCCAATCTTACACCCCACGTGTCCCTTACGTACACATAG___AGGACGTTGTGAGGGCTTTCATCTTCTTGTATGAACATCCAGACTCCAAAGGGAGGTACATCTGCTCTCTCCAGGACGTAGCCTTGGAAGAACTTGCTCAAGTCTTTCAGAACCGACATCAACTTAATGTACCTGCAAAGTTTGATAATCTTCGTAGTGATTACATATATCCTTGTGTGGACTCTGGAAAGCTGAAAAAGCTTGGATTTGAGTACAAATATTCTTTAGAGGATATCGTTGATGATGCAGTCAAATCTTATAAACGGAGAGGACTCTTTTAAATGGCACATACGCCTGGCATGATCATAATGTTATTTGCTTGGTAGTGTGACAGTATGCTTCAATAGTTTCACTGTTACTCGTAAAGTTTCATTTATATTTTCAGAAAATAAATCTCATTTTACGTTTTGGCATCTGCTGATCAATCTGTGAATGCCAACGGTGCTTCTTCGGTTGAAGTT

Fln Alignment:

sp_v1.1_unigene83459___NKRVVCVTGANGYIGSWLVMRLLEHGYYVHGTVRDPEDPGKVGHLLGLPGASEKLKLFKADLNNEMAFDDAVSGCQGVFHVAKPVNLDSNALQGEVVGPAVRGTVNLLRACERSGTVKRVIHTSSxxxQPPDTVLDESHWTSVEYCRKTKMVGWMYYIANTYAEEGAHKFGSENKMDVISILPAITVGDFLTLQIPGSVATLMAL
A9NNA9_______________HRGTVCVTGAAGFIGSWLIMRLLERGYTVRATVRDTGKPLKTKHLLDLPGANERLTLWKADLDDERSFDAAVDGCEGVFHVATPMDFESEDPENDIIKPTVNGVLNVMKSCAKAKSVKRVVFTSSxxxQTPGKVFDESCWTNVDLCRKVKMTGWMYFVSKTLAEKAAWDFAEENKIDLLTVIPTLVVGPFIMQTMPPSMITALAL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain