SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83389

Length: 1132 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83389

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Syntaxin-71 n=1 Tax=Annona cherimola RepID=C0L7E7_ANNCH	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	syp71 (syntaxin of plants 71) protein transporter	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein targeting to membrane	GO:0006612	Biological Process	0.0	80%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Target SNARE coiled-coil domain	IPR000727	-	0.0	80%
Blast2go	Syntaxin/epimorphin, conserved site	IPR006012	-	0.0	80%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: D5AC68

Fln msg: Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 249 - 267

Fln protein: KIIDKQKENQISGNDAFVRLYTVVEADIEAAKQKADDAAKEKNRAVVATLNAEIRRTKARLHEEIPKLQKLAQKKVKGLSKEDIVTRNDLVSALADKIDSIPDGTNAGTGRTAAWKTSTTRMEIKIDSSSPGGMNTEFYEHTEESKQFRQEFEMRRAKQDQGLDMIAEGLDTLKNMAHDINEELDRQVPLIDEIDTKVDKATSDLKNTNVRLKDTVTKLRSSRNFCIDIILLCIILGIAAYLYNVLKK*

Protein Length: 250

Fln nts: AATCCTACTGCAAGAGATTTGAAATCAAGGCTCTCAGCTGGAGTCCTTGTTTTCTTCTCGGGTAAGGAATTCCGAGGGAAAACGCAGATCCGCAAGAGTAGGCTTCGAGCACATCAGATCTGATCACTGCGAAGATGAGTGTCATCGACATTCTTACGCGGGTGGACGCCATCTGCAACAAGT_-_ATGAAAAATAATCGACAAACAGAAGGAGAATCAGATCTCCGGAAATGACGCCTTCGTTAGGCTTTATACCGTTGTCGAGGCCGACATCGAGGCCGCAAAGCAGAAAGCTGACGATGCCGCGAAGGAGAAGAACAGGGCAGTGGTCGCGACTCTGAATGCTGAAATTCGACGCACCAAGGCCAGATTGCATGAAGAGATCCCCAAGTTGCAGAAATTGGCTCAGAAAAAGGTTAAAGGCCTTTCAAAAGAAGATATTGTTACTCGGAATGATCTAGTGTCAGCTTTAGCAGACAAGATTGATTCAATTCCAGATGGAACAAACGCAGGCACTGGGCGAACTGCAGCATGGAAGACATCAACTACACGTATGGAAATCAAAATTGACTCATCATCTCCAGGTGGGATGAATACTGAGTTTTATGAGCACACTGAGGAATCTAAGCAGTTCAGACAGGAGTTTGAAATGCGGAGAGCGAAACAGGATCAAGGATTAGACATGATTGCAGAGGGCCTTGATACATTGAAGAACATGGCTCACGACATAAATGAGGAACTGGATAGACAAGTGCCTTTGATTGATGAGATTGACACAAAGGTGGATAAGGCAACATCAGACCTTAAGAACACAAATGTGAGATTGAAAGACACAGTTACTAAGTTGCGGTCCAGTCGCAATTTCTGTATTGATATCATTCTGCTTTGCATAATACTGGGGATTGCTGCTTACTTATACAATGTCTTGAAGAAATAGATGAAGATTTCAAAACCAGAAGTTGCCTCAGCGGGAAGCAATGTGACTTATAAGTTGGTTTTTCCTGGCATGTGCAGAGAACTGATTGCCTTCTTCTCTGCAGTATTGCACTATTCACAATTTCACAAACATGTTTGTGGTATTATTCACAATGATGGCATTTGTTTAATGTGTTACCTCTTTTAGTCTGATGATTTT

Fln Alignment:

sp_v1.1_unigene83389___IDKQKENQISGNDAFVRLYTVVXXXXXXXXXXXXXXXXXXNRAVVATLNAEIRRTKARLHEEIPKLQKLAQKKVKGLSKEDIVTRNDLVSALADKIDSIPDGTNAGTGRTAAWKTSTTRMEIKIDSSSPGGMNTEFYEHTEESKQFRQEFEMRRAKQDQGLDMIAEGLDTLKNMAHDINEELDRQVPLIDEIDTKVDKATSDLKNTNVRLKDTVTKLRSSRNFXXXXXXXXXXXXXXXXXXNVLKK
D5AC68_______________IEKHRENQISGSDAFVRLYTVVESDIEAAKQKSDDAAKEKNRAVVATLNAEIRRTKARLHEEIPKLQKLAQKKVKGVSKEDIVARNDLVSALADKIDSIPDGTNAGTVRTAAWKTSATRMEIKIDSSSPGGMNTEFYEHTEESKQFRQDFEMRRAKQDQGLDMISEGLDTLKNMAQDINEELDRQVPLIDEIDTKVDKATSDLKNTNVRLKDTVNKLRSSRNFCIDIILLCIILGIAAYLYNVLKK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain