SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83198

Length: 1605 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83198

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Dev_Cell_Death multi-domain protein	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Development/cell death domain	IPR013989	-	0.0	73%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQS0

Fln msg: Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 322 - 394

Fln protein: KKSQGQDDKKPETAGGVKEDIQGLIFMCNSKTKEDCFRYRVFGLPKAHKELVEKVTNGMRLFLYDFNLRLMYGIYKAAGKGGYELEPDAFKTSKKPFPAQVRFRIQKECLPLPEEKFKAAIKDNYYGKNKFKFQLNAEQVKKLSQLFRPVPAQNSRGPRDSRPAKPVRDNARVRDNARAPRRVPFVDQVPQVPLYRPDTVLPQRAPLLDAYALQASDPYASVYQRQALPPADPLPVRNGLLSDIDYRGVDPGLEYLHRQRIRERVLEQNYLDEISRPYVPREADYADAALRRADFTSPPGRSYPSLLGSSSLLGSSSLYRY*

Protein Length: 323

Fln nts: TGGTATCAACGCAGAGTACATGGGGGAGGTCTTTTGTATCACACTCGTCCTCGGCTGTGGACTTCGGTTTTTGCTTGGGTTGTGGACGGTGGCGAGGTGTGTCTGTTCGAAGAAACCCTAGTCTCTCGCATATTCGGACCCACAGGTGTTCCGGCTGGTTTCTGAGCGCAAGAGTCGAAGAAAAGCTGCTCTGTAACGGCAGGGCAGTCAGGCCAAAGGGGAAGAACAAGGGAAAGTCGATGGCCAACGACAAGGTCGAGGTCGAGGTCGAGAAGGAGATCTCTGTTTCTGAGAAGGTGGAAACCATAGAAGAGCCTAAGGTAGACAAGGATTCTGAAAAGCTCGACGAACCCGCGAACATGGCTATAGATGAAGCTGCTGATGGTGCTCCAGAGGAAAAGACTGGAGGTGAGAAGAACGAGGAAAAGGACGAAGATACGAAGAAAGGAGACAATAAATCTGGCAAGAACAAGAAGAAAAAGTTTAAGAAGAATAAAAGAAGTCGCAGGGTCAGGATGATAAGAAGCCTGAAACAGCCGGTGGTGTGAAGGAAGACATTCAAGGGCTAATATTTATGTGCAACTCGAAAACAAAGGAGGACTGTTTCCGTTATCGTGTTTTTGGGTTGCCTAAGGCGCACAAGGAGCTTGTTGAAAAGGTTACGAATGGAATGCGGCTCTTTTTGTATGACTTCAACCTTCGTCTGATGTATGGAATATACAAGGCTGCAGGTAAAGGTGGATATGAACTTGAACCTGATGCATTCAAGACTTCGAAGAAGCCTTTTCCAGCCCAGGTACGCTTCCGTATTCAGAAGGAATGCTTGCCATTGCCAGAGGAAAAATTCAAGGCTGCGATTAAAGATAATTACTATGGGAAGAACAAGTTCAAGTTTCAACTGAACGCAGAACAGGTTAAAAAGTTGTCCCAGCTGTTTCGACCGGTACCTGCTCAGAACTCTCGTGGTCCACGAGACAGTAGGCCTGCGAAACCTGTTCGTGATAATGCTAGGGTTCGTGATAATGCTAGGGCACCAAGACGTGTACCATTTGTTGATCAGGTTCCCCAAGTTCCATTATATCGACCTGACACAGTATTGCCTCAGCGTGCACCATTGCTTGATGCTTATGCTTTGCAAGCATCAGATCCGTATGCCTCTGTGTATCAGAGGCAGGCCCTACCTCCTGCTGATCCATTGCCTGTGAGGAATGGGTTGTTATCTGATATTGATTATCGCGGGGTAGATCCAGGGCTTGAATATTTACACCGTCAGAGAATAAGAGAACGTGTTTTAGAGCAGAATTATCTTGATGAGATCAGTAGGCCTTATGTGCCAAGAGAGGCTGACTACGCTGATGCTGCCCTTCGTAGAGCTGACTTCACATCTCCTCCTGGACGTTCATATCCTTCACTCTTAGGTTCATCTTCACTGCTAGGGTCATCTTCACTGTATCGGTACTGA___TTGAGATTTTATAATTTCTGGATGTTTTGGTAGCGTACATTTTTGAATTATCTTTGGAGACTGGAATCATAAGGAGCTTGATAGTACAGTCGGCACAAACATTGCTATGGAAAAGAACGTGCTATTTGTTTGACTTTTGGTTT

Fln Alignment:

sp_v1.1_unigene83198___QDDKKPETAGGVKEDIQGLIFMCNSKTKEDCFRYRVFGLPKAHKELVEKVTNGMRLFLYDFNLRLMXXXXXXXXXXXXELEPDAFKTSKKPFPAQVRFRIQKECLPLPEEKFKAAIKDNYYGKNKFKFQLNAEQVKKLSQLFRPVPAQNSRGPRDSRPAKPXXXXXXXXXXXXXXXXXXFVDQVPQVPLYRPDTVLPQRAPLLDAYALQASDPYASVYQRQALPPADPLPVRNGLLSDIDYRGVDPGLEYLHRQRIRERVLEQNYLDEISRPYVP
B8LQS0_______________QDDKKPETTGGTKDDLAGLIFMCNSKTKQDCFRYRVFGLPKSNKELVEKVTNGMRLFLYDFDLRLMYGIYKAAGSGGYDLEPEAFKSTKKPFPAQVRFRIQKECLPLSEEKFKVAIKDNYYGKKKFKFELNAEQVKNLVQLFKPVPAQNSRGPRDSRPGRP-------SRVAREPRRAPFVDQVPQVPLYRPDTVLPQRAPYVDAYALQASDPYASVYQRQALPPSDPLPVRNGLVSDFDYRGVDPGLEYLHRQRIREQI----YLDEINRTYVP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain