SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene83165

Length: 997 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene83165

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Guanine nucleotide-binding protein subunit beta-like protein n=6 Tax=rosids RepID=GBLP_SOYBN	-	-	84%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	protein	-	-	89%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P1N7

Fln msg: atg_distance in limit (1-15): atg_distance = 4, your sequence is shorter than subject: 296 - 316

Fln protein: MEGHTDAVTAIATPIDNSDMIVSSSRDKSILLWNLTKEPEKYGVPRRRLTGHSHFVQDVVISSDGQFALSGSWDGELRLWDLNTGLTTRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQPDAEGHSNWISCVRFSPSATNPTIVSCSWDRTVKVWNLTNCKLRNTLVGHGGYVNTAAVSPDGSLCASGGKDGVTMLWDLAEGKRLYSLDAGDIIYALCFSPNRYWLCAATQQCVKIWDPSARFHSQQEGSDTLLYEFELECRRKHFWLYRWKIRVWGIGHV*

Protein Length: 297

Fln nts: GCACTGGTTCTGCGCGGCACA_-_ATGGAGGGCCACACCGACGCGGTGACGGCCATCGCGACCCCGATTGACAACTCGGACATGATCGTCTCTTCATCCCGCGACAAGTCGATCCTCCTGTGGAACCTAACCAAGGAGCCCGAGAAGTATGGTGTCCCACGGCGCCGCCTGACTGGCCACTCACACTTCGTCCAGGACGTGGTCATCTCCTCCGATGGCCAGTTTGCCCTCTCCGGCTCTTGGGACGGCGAGCTCCGCCTCTGGGATCTCAACACAGGCCTCACCACCCGGCGCTTCGTTGGCCACACCAAGGACGTCCTGAGCGTCGCGTTCTCCATCGATAACCGACAGATCGTTTCCGCCTCCCGTGACCGCACCATCAAGCTCTGGAACACCCTTGGCGAGTGCAAATACACCATCCAGCCCGATGCAGAGGGCCACTCCAACTGGATCTCCTGCGTCCGATTTTCCCCTTCGGCCACCAACCCCACCATCGTGTCGTGCTCATGGGACCGCACGGTAAAGGTATGGAATTTAACAAACTGTAAGCTCAGGAATACGCTCGTCGGACACGGAGGCTATGTGAACACGGCCGCCGTTTCGCCCGACGGTTCGCTTTGCGCCAGTGGCGGCAAAGACGGGGTTACCATGCTCTGGGATTTGGCGGAGGGGAAGCGGCTGTACTCGCTGGATGCCGGGGATATTATTTATGCCCTGTGCTTTAGCCCCAACAGATACTGGCTCTGTGCTGCCACTCAGCAGTGTGTGAAGATCTGGGATCCTTCGGCCCGATTTCATTCCCAACAAGAAGGCTCAGATACCCTATTGTACGAGTTTGAGTTGGAGTGCAGACGGAAGCATTTCTGGTTATACAGATGGAAAATCAGGGTGTGGGGAATTGGACATGTTTAA___GCTTTAGAGGCAATGGTAGATTATGAAGTCAACACCAGGGAGTTTGACCGTTTGGGACATTAATTTTGTTCGAGCATGTGTTCTTTTT

Fln Alignment:

sp_v1.1_unigene83165___ALVLRGTMEGHTDAVTAIATPIDNSDMIVSSSRDKSILLWNLTKEPEKYGVPRRRLTGHSHFVQDVVISSDGQFALSGSWDGELRLWDLNTGLTTRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQPDAEGHSNWISCVRFSPSATNPTIVSCSWDRTVKVWNLTNCKLRNTLVGHGGYVNTAAVSPDGSLCASGGKDGVTMLWDLAEGKRLYSLDAGDIIYALCFSPNRYWLCAATQQCVKIWDPSARFHSQQEGSD-------TLLYEFELECRRKHFWLYR----WKIRVWGIGHV
A9P1N7_______________ALVLRGTMEGHTDAVTAIATPIDNSDMIVSSSRDKSILLWNLTKEPEKYGVPRRRLTGHSHFVQDVVISSDGQFALSGSWDSELRLWDLNTGLTTRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQPDAEGHSNWISCVRFSPSATNPTIVSCSWDRTVKVWNLTNCKLRNTLVGHGGYVNTAAVSPDGSLCASGGKDGVTMLWDLAEGKRLYSLDAGDIIYALCFSPNRYWLCAATQQCVKIWDLESKSIVADLRPDFIPNKKAQIPYCTSLSWSADGSTLFSGYTDGKIRVWGIGHV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain