SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene82544

Length: 724 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene82544

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Histone H2B.6 n=62 Tax=Spermatophyta RepID=H2B6_ARATH	-	-	9.99967e-42	95%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	histone h2b	-	-	5.46506e-43	99%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone H2B	IPR000558	-	5.46506e-43	99%
Blast2go	Histone core	IPR007125	-	5.46506e-43	99%
Blast2go	Histone-fold	IPR009072	-	5.46506e-43	99%

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
349	66		33		0.961092
361		66		33	0.951506
608			20	80	0.995494
609			80	20	0.995493
611		20		80	0.995493
614			20	80	0.995493
615		80		20	0.995493
618		80	20		0.995493
620			20	80	0.995493
621			20	80	0.995493
622		20		80	0.995493
625	20		80		0.995493
626	20			20	0.99255
627	20	80			0.995493
628			20	80	0.995493
629			20	80	0.995493
672		66		33	0.997453

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain