SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene82541

Length: 696 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene82541 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ribosomal protein S26; K02976 small subunit ribosomal protein S26e	-	-	1.0e-27	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Blast2go	40s ribosomal protein	-	-	7.35566e-34	94%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Ribosomal protein S26e	IPR000892	-	7.35566e-34	94%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
504	88		11		0.999952
505	88			11	0.999952
506		88	11		0.999952
508	88	11			0.999952
517		88	11		0.999952
521			11	82	0.999919
522	11	5		82	0.999919
524		6	68	25	1.0
539		25		75	1.0
547		12	87		0.992554
548		12	87		0.992554
550	16	16	66		0.988813
551		16		83	0.994512
553	83			16	0.994512
555	20		80		0.995493
558	33	66			0.997452
559		66	33		0.997452
560		66	33		0.997452
561		66	33		0.997452
562	75			25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain