SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene82453

Length: 792 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene82453

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UPF0057 domain containing protein	-	-	2.0e-21	60%
FL-Next	tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	low temprature induced-like protein	-	-	3.06811e-24	92%

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
89	75	25			0.99649
96			25	75	0.99649
141		25		75	0.99649
143	25			75	0.99649
162	75		25		0.99649
166	75			25	0.99649
207		20	80		0.995496
209	80			20	0.995496
210		80	20		0.995496
212		20		80	0.995496
218		20		80	0.995493
221			75	25	0.996473
223	25	75			0.996473
224	75	25			0.996473
227	75	25			0.996473
228	20	80			0.995493
243		25		75	0.996486
355		75	25		0.996473
367		60		40	1.0
396	60		40		1.0
401		40		60	1.0
407		50		50	1.0
408		50	50		1.0
410		50		50	1.0
502	50			50	1.0
553			75	25	0.996473
577		16		83	0.994515
586		60	40		1.0
600	50		50		1.0
601		20	80		0.995505

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain