SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene81333

Length: 637 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene81333

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative ripening-related protein n=1 Tax=Vitis vinifera RepID=Q9M4H5_VITVI	-	-	1.0e-27	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	protein	-	-	0.0	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	HAD-superfamily hydrolase, subfamily IA, variant 3	IPR006402	-	0.0	78%
Blast2go	HAD-like domain	IPR023214	-	0.0	78%

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
29	33	66			0.997476
242	40			60	1.0
255	60		40		1.0
273	40		60		1.0
274		60	40		1.0
277	80	20			0.995493
280	20	80			0.995493
295	50			50	1.0
302		33	66		1.0
307	33		66		1.0
309	33		66		1.0
312		83		16	0.994516
313	83	16			0.994516
317	83	16			0.994516
319	16			83	0.994516
327	33		66		1.0
335			60	40	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain