SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene81285

Length: 747 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene81285

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	82%
Blast2go	probable aquaporin	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	87%
Blast2go	water transport	GO:0006833	Biological Process	87%
Blast2go	water channel activity	GO:0015250	Molecular Function	87%
Blast2go	plasma membrane	GO:0005886	Cellular Component	87%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
402		33		66	0.997452
452			50	50	1.0
485	33	66			0.997452
506		80		20	0.995493
551		33		66	0.997452

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain